Transcriptome profiling reveals cytokinin promoted callus regeneration in Brassica juncea

Transcriptomic and biochemical analysis of upland cotton (Gossypium hirsutum) and a chromosome segment substitution line from G. hirsutum × G. barbadense in response to Verticillium dahliae infection

(2019) Peng-tao Li et al.   BMC PLANT BIOLOGY

Arabidopsis zinc finger homeodomain protein ZHD5 promotes shoot regeneration and confers other cytokinin-related phenotypes when overexpressed

(2019) Jin-Baek Kim et al.   PLANT CELL TISSUE AND ORGAN CULTURE

A transcriptome analysis reveals a role for the indole GLS-linked auxin biosynthesis in secondary dormancy in rapeseed (Brassica napus L.)

(2019) Lei Liu et al.   BMC PLANT BIOLOGY

WEGO 2.0: a web tool for analyzing and plotting GO annotations, 2018 update

(2018) Jia Ye et al.   NUCLEIC ACIDS RESEARCH

Precise editing of CLAVATA genes in Brassica napus L. regulates multilocular silique development

(2018) Yang Yang et al.   PLANT BIOTECHNOLOGY JOURNAL

Brassinosteroid increases the cytokinin efficiency to induce direct somatic embryogenesis in leaf explants of Coffea arabica L. (Rubiaceae)

(2018) Rosana Mary Sartor Chone et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Differential analysis of RNA-seq incorporating quantification uncertainty

(2017) Harold Pimentel et al.   NATURE METHODS

DNA METHYLTRANSFERASE1 -mediated shoot regeneration is regulated by cytokinin-induced cell cycle in Arabidopsis

(2017) Hui Liu et al.   NEW PHYTOLOGIST

Optimization of culture medium and temperature for the in vitro germination of oil palm pollen

(2017) Yiyun Lin et al.   SCIENTIA HORTICULTURAE

Trilocular phenotype in Brassica juncea L. resulted from interruption of CLAVATA1 gene homologue (BjMc1) transcription

(2017) Ping Xu et al.   Scientific Reports

Plant regeneration: cellular origins and molecular mechanisms

(2016) Momoko Ikeuchi et al.   DEVELOPMENT

The genome sequence of allopolyploid Brassica juncea and analysis of differential homoeolog gene expression influencing selection

(2016) Jinghua Yang et al.   NATURE GENETICS

Transcriptional identification and characterization of differentially expressed genes associated with embryogenesis in radish (Raphanus sativus L.)

(2016) Lulu Zhai et al.   Scientific Reports

Historical review of research on plant cell dedifferentiation

(2015) Munetaka Sugiyama   JOURNAL OF PLANT RESEARCH

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Transcriptome profiling reveals auxin suppressed anthocyanin biosynthesis in red-fleshed apple callus (Malus sieversii f. niedzwetzkyana)

(2015) Xiao-Hao Ji et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Identification of putative homologs of Larix decidua to BABYBOOM (BBM), LEAFY COTYLEDON1 (LEC1), WUSCHEL-related HOMEOBOX2 (WOX2) and SOMATIC EMBRYOGENESIS RECEPTOR-like KINASE (SERK) during somatic embryogenesis

(2015) Andrea Rupps et al.   PLANTA

The brassinosteroid signaling network — a paradigm of signal integration

(2014) Wenfei Wang et al.   CURRENT OPINION IN PLANT BIOLOGY

A roadmap to embryo identity in plants

(2014) Tatyana Radoeva et al.   TRENDS IN PLANT SCIENCE

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

Ethylene signaling: simple ligand, complex regulation

(2013) Catharina Merchante et al.   CURRENT OPINION IN PLANT BIOLOGY

A type III ACC synthase, ACS7, is involved in root gravitropism in Arabidopsis thaliana

(2013) Shih-Jhe Huang et al.   JOURNAL OF EXPERIMENTAL BOTANY

The bHLH proteins BEE and BIM positively modulate the shade avoidance syndrome in Arabidopsis seedlings

(2013) Nicolás Cifuentes-Esquivel et al.   PLANT JOURNAL

AHP6 Inhibits Cytokinin Signaling to Regulate the Orientation of Pericycle Cell Division during Lateral Root Initiation

(2013) Sofia Moreira et al.   PLoS One

Cytokinin Signaling Networks

(2012) Ildoo Hwang et al.   Annual Review of Plant Biology

Auxin–Cytokinin Interaction Regulates Meristem Development

(2011) Ying-Hua Su et al.   Molecular Plant

Auxin: A major regulator of organogenesis

(2010) Isabelle Bohn-Courseau   COMPTES RENDUS BIOLOGIES

DFL1, an auxin-responsive GH3 gene homologue, negatively regulates shoot cell elongation and lateral root formation, and positively regulates the light response of hypocotyl length

(2010) Miki Nakazawa et al.   PLANT JOURNAL

Arabidopsis ARR1 and ARR2 response regulators operate as transcriptional activators

(2010) Hiroe Sakai et al.   PLANT JOURNAL

Role of A-type ARABIDOPSIS RESPONSE REGULATORS in meristem maintenance and regeneration

(2009) Sabine Buechel et al.   EUROPEAN JOURNAL OF CELL BIOLOGY

Gene expression profiling identifies two regulatory genes controlling dormancy and ABA sensitivity in Arabidopsis seeds

(2009) José M. Barrero et al.   PLANT JOURNAL

Cytokinins modulate auxin-induced organogenesis in plants via regulation of the auxin efflux

(2009) M. Pernisova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Auxin: The Looping Star in Plant Development

(2008) René Benjamins et al.   Annual Review of Plant Biology

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Domain II Mutations in CRANE/IAA18 Suppress Lateral Root Formation and Affect Shoot Development in Arabidopsis thaliana

(2008) Takeo Uehara et al.   PLANT AND CELL PHYSIOLOGY

The Transcription Factor MtSERF1 of the ERF Subfamily Identified by Transcriptional Profiling Is Required for Somatic Embryogenesis Induced by Auxin Plus Cytokinin in Medicago truncatula

(2008) F. R. Mantiri et al.   PLANT PHYSIOLOGY