Light-driven anaerobic microbial oxidation of manganese

Formation of ordered dolomite in anaerobic photosynthetic biofilms

(2019) Mirna Daye et al.   GEOLOGY

Dating phototrophic microbial lineages with reticulate gene histories

(2018) C. Magnabosco et al.   Geobiology

Open-source sensor for measuring oxygen partial pressures below 100 microbars

(2018) Mihkel Pajusalu et al.   PLoS One

Identification of a Third Mn(II) Oxidase Enzyme in Pseudomonas putida GB-1

(2016) Kati Geszvain et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Manganese oxide shuttling in pre-GOE oceans – evidence from molybdenum and iron isotopes

(2016) Florian Kurzweil et al.   EARTH AND PLANETARY SCIENCE LETTERS

Microbial processes of the carbon and sulfur cycles in an ice-covered, iron-rich meromictic lake Svetloe (Arkhangelsk region, Russia)

(2016) Alexander S. Savvichev et al.   ENVIRONMENTAL MICROBIOLOGY

Anoxic oxidation of chromium

(2016) Christopher Oze et al.   GEOLOGY

Genomics of a phototrophic nitrite oxidizer: insights into the evolution of photosynthesis and nitrification

(2016) James Hemp et al.   ISME Journal

Microbe–microbe interactions trigger Mn(II)-oxidizing gene expression

(2016) Jinsong Liang et al.   ISME Journal

Unusual manganese enrichment in the Mesoarchean Mozaan Group, Pongola Supergroup, South Africa

(2016) Frantz Ossa Ossa et al.   PRECAMBRIAN RESEARCH

Extracellular haem peroxidases mediate Mn(II) oxidation in a marineRoseobacterbacterium via superoxide production

(2015) Peter F. Andeer et al.   ENVIRONMENTAL MICROBIOLOGY

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

(2015) Donovan H. Parks et al.   GENOME RESEARCH

The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)

(2015) Marcel Huntemann et al.   Standards in Genomic Sciences

VizBin - an application for reference-independent visualization and human-augmented binning of metagenomic data

(2015) Cedric C Laczny et al.   Microbiome

LUMOS - A Sensitive and Reliable Optode System for Measuring Dissolved Oxygen in the Nanomolar Range

(2015) Philipp Lehner et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

A novel cohabitation between two diazotrophic cyanobacteria in the oligotrophic ocean

(2014) Lily M Momper et al.   ISME Journal

Evidence for oxygenic photosynthesis half a billion years before the Great Oxidation Event

(2014) Noah J. Planavsky et al.   Nature Geoscience

Catalytic oxidation of manganese(II) by multicopper oxidase CueO and characterization of the biogenic Mn oxide

(2014) Jianmei Su et al.   WATER RESEARCH

Atmospheric oxygenation three billion years ago

(2013) Sean A. Crowe et al.   NATURE

Manganese-oxidizing photosynthesis before the rise of cyanobacteria

(2013) J. E. Johnson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mn(II,III) oxidation and MnO2 mineralization by an expressed bacterial multicopper oxidase

(2013) C. N. Butterfield et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chlorophyll Biosynthesis Gene Evolution Indicates Photosystem Gene Duplication, Not Photosystem Merger, at the Origin of Oxygenic Photosynthesis

(2012) Filipa L. Sousa et al.   Genome Biology and Evolution

GenBank

(2012) Dennis A. Benson et al.   NUCLEIC ACIDS RESEARCH

Porous calcium–manganese oxide microspheres for electrocatalytic oxygen reduction with high activity

(2012) Xiaopeng Han et al.   Chemical Science

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Effect of electron donors on the fractionation of sulfur isotopes by a marine Desulfovibrio sp.

(2011) Min Sub Sim et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Large Sulfur Isotope Fractionation Does Not Require Disproportionation

(2011) M. S. Sim et al.   SCIENCE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mn(II) Oxidation Is Catalyzed by Heme Peroxidases in "Aurantimonas manganoxydans" Strain SI85-9A1 and Erythrobacter sp. Strain SD-21

(2009) C. R. Anderson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Stream geochemistry, chemical weathering and CO2 consumption potential of andesitic terrains, Dominica, Lesser Antilles

(2009) Steven T. Goldsmith et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Mineral evolution

(2008) R. M. Hazen et al.   AMERICAN MINERALOGIST

Structure of in the range K from neutron time-of-flight total scattering

(2008) E.S. Božin et al.   JOURNAL OF PHYSICS AND CHEMISTRY OF SOLIDS