Culture‐independent tracking of Vibrio cholerae lineages reveals complex spatiotemporal dynamics in a natural population
出版年份 2020 全文链接
标题
Culture‐independent tracking of
Vibrio cholerae
lineages reveals complex spatiotemporal dynamics in a natural population
作者
关键词
-
出版物
ENVIRONMENTAL MICROBIOLOGY
Volume -, Issue -, Pages -
出版商
Wiley
发表日期
2020-01-23
DOI
10.1111/1462-2920.14921
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Niche adaptation limits bacteriophage predation of Vibrio cholerae in a nutrient-poor aquatic environment
- (2019) Cecilia A. Silva-Valenzuela et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Expanding dynamics of the virulence-related gene variations in the toxigenic Vibrio cholerae serogroup O1
- (2019) Zhenpeng Li et al. BMC GENOMICS
- Defining endemic cholera at three levels of spatiotemporal resolution within Bangladesh
- (2018) Daryl Domman et al. NATURE GENETICS
- Spatiotemporal Dynamics of Vibrio cholerae in Turbid Alkaline Lakes as Determined by Quantitative PCR
- (2018) Rupert Bliem et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Genomic insights into the 2016–2017 cholera epidemic in Yemen
- (2018) François-Xavier Weill et al. NATURE
- High genetic diversity ofVibrio choleraein the European lake Neusiedler See is associated with intensive recombination in the reed habitat and the long-distance transfer of strains
- (2017) Carina Pretzer et al. ENVIRONMENTAL MICROBIOLOGY
- Ecological dynamics and co-occurrence among marine phytoplankton, bacteria and myoviruses shows microdiversity matters
- (2017) David M Needham et al. ISME Journal
- Antibiotics reduce genetic diversity of core species in the honeybee gut microbiome
- (2017) Kasie Raymann et al. MOLECULAR ECOLOGY
- Genomic history of the seventh pandemic of cholera in Africa
- (2017) François-Xavier Weill et al. SCIENCE
- Integrated view ofVibrio choleraein the Americas
- (2017) Daryl Domman et al. SCIENCE
- Sequential displacement of Type VI Secretion System effector genes leads to evolution of diverse immunity gene arrays in Vibrio cholerae
- (2017) Paul C. Kirchberger et al. Scientific Reports
- A Small Number of Phylogenetically Distinct Clonal Complexes Dominate a Coastal Vibrio cholerae Population
- (2016) Paul C. Kirchberger et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Whole-Genome Enrichment Provides Deep Insights into Vibrio cholerae Metagenome from an African River
- (2016) L. Vezzulli et al. MICROBIAL ECOLOGY
- DADA2: High-resolution sample inference from Illumina amplicon data
- (2016) Benjamin J Callahan et al. NATURE METHODS
- Cospeciation of gut microbiota with hominids
- (2016) A. H. Moeller et al. SCIENCE
- Phylogenetic Diversity of Vibrio cholerae Associated with Endemic Cholera in Mexico from 1991 to 2008
- (2016) Seon Young Choi et al. mBio
- Spatiotemporal Dynamics of Vibrio spp. within the Sydney Harbour Estuary
- (2016) Nachshon Siboni et al. Frontiers in Microbiology
- Origins of pandemic Vibrio cholerae from environmental gene pools
- (2016) B. Jesse Shapiro et al. Nature Microbiology
- Environmental Surveillance for Toxigenic Vibrio cholerae in Surface Waters of Haiti
- (2015) Amy M. Kahler et al. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE
- Non-O1/Non-O139 Vibrio cholerae Carrying Multiple Virulence Factors and V. cholerae O1 in the Chesapeake Bay, Maryland
- (2015) Daniela Ceccarelli et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
- (2015) Alma E. Parada et al. ENVIRONMENTAL MICROBIOLOGY
- The Dynamics of Genetic Interactions betweenVibrio metoecusandVibrio cholerae, Two Close Relatives Co-Occurring in the Environment
- (2015) Fabini D. Orata et al. Genome Biology and Evolution
- Marine microbial community dynamics and their ecological interpretation
- (2015) Jed A. Fuhrman et al. NATURE REVIEWS MICROBIOLOGY
- The out-of-the-delta hypothesis: dense human populations in low-lying river deltas served as agents for the evolution of a deadly pathogen
- (2015) Yan Boucher et al. Frontiers in Microbiology
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Competition-dispersal tradeoff ecologically differentiates recently speciated marine bacterioplankton populations
- (2014) Y. Yawata et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Associations and dynamics of Vibrionaceae in the environment, from the genus to the population level
- (2014) Alison F. Takemura et al. Frontiers in Microbiology
- Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
- (2013) James J. Kozich et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Environmental reservoirs and mechanisms of persistence of Vibrio cholerae
- (2013) Carla Lutz et al. Frontiers in Microbiology
- Shape and evolution of the fundamental niche in marine Vibrio
- (2012) Arne C Materna et al. ISME Journal
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- Temperature affects Vibrio cholerae O1 El Tor persistence in the aquatic environment via an enhanced expression of GbpA and MSHA adhesins
- (2010) Monica Stauder et al. Environmental Microbiology Reports
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae
- (2009) J. Chun et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Testing of null hypotheses in exploratory community analyses: similarity profiles and biota-environment linkage
- (2008) K. Robert Clarke et al. JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY
- Resource Partitioning and Sympatric Differentiation Among Closely Related Bacterioplankton
- (2008) D. E. Hunt et al. SCIENCE
- Seasonality of cholera from 1974 to 2005: a review of global patterns
- (2008) Michael Emch et al. International Journal of Health Geographics
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now