Comparative fiber property and transcriptome analyses reveal key genes potentially related to high fiber strength in cotton (Gossypium hirsutum L.) line MD52ne

Use of Attenuated Total Reflection Fourier Transform Infrared (ATR FT-IR) Spectroscopy in Direct, Nondestructive, and Rapid Assessment of Developmental Cotton Fibers Grown in Planta and in Culture

(2015) Yongliang Liu et al.   APPLIED SPECTROSCOPY

Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution

(2015) Fuguang Li et al.   NATURE BIOTECHNOLOGY

Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement

(2015) Tianzhen Zhang et al.   NATURE BIOTECHNOLOGY

The plant cell wall integrity maintenance mechanism – A case study of a cell wall plasma membrane signaling network

(2015) Thorsten Hamann   PHYTOCHEMISTRY

COBRA-LIKE2, a Member of the Glycosylphosphatidylinositol-Anchored COBRA-LIKE Family, Plays a Role in Cellulose Deposition in Arabidopsis Seed Coat Mucilage Secretory Cells,

(2015) Daniela Ben-Tov et al.   PLANT PHYSIOLOGY

Phytohormonal Networks Promote Differentiation of Fiber Initials on Pre-Anthesis Cotton Ovules Grown In Vitro and In Planta

(2015) Hee Jin Kim et al.   PLoS One

The MYB46/MYB83-mediated transcriptional regulatory programme is a gatekeeper of secondary wall biosynthesis

(2014) J.-H. Ko et al.   ANNALS OF BOTANY

Aberrant phenotype and transcriptome expression during fiber cell wall thickening caused by the mutation of the Im gene in immature fiber (im) mutant in Gossypium hirsutum L

(2014) Cheng Wang et al.   BMC GENOMICS

Cotton fiber elongation network revealed by expression profiling of longer fiber lines introgressed with different Gossypium barbadense chromosome segments

(2014) Lei Fang et al.   BMC GENOMICS

Identification of cotton fiber quality quantitative trait loci using intraspecific crosses derived from two near-isogenic lines differing in fiber bundle strength

(2014) Md. S. Islam et al.   MOLECULAR BREEDING

The Li2 Mutation Results in Reduced Subgenome Expression Bias in Elongating Fibers of Allotetraploid Cotton (Gossypium hirsutum L.)

(2014) Marina Naoumkina et al.   PLoS One

Chitinase-Like (CTL) and Cellulose Synthase (CESA) Gene Expression in Gelatinous-Type Cellulosic Walls of Flax (Linum usitatissimum L.) Bast Fibers

(2014) Natalia Mokshina et al.   PLoS One

Transcriptomic Analysis of Fiber Strength in Upland Cotton Chromosome Introgression Lines Carrying Different Gossypium barbadense Chromosomal Segments

(2014) Lei Fang et al.   PLoS One

Understanding the influence of fiber length on the High Volume Instrument™ measurement of cotton fiber strength

(2014) Geoffrey RS Naylor et al.   TEXTILE RESEARCH JOURNAL

Functional analyses of cotton (Gossypium hirsutum L.) immature fiber (im) mutant infer that fiber cell wall development is associated with stress responses

(2013) Hee Kim et al.   BMC GENOMICS

The Arabidopsis LRR-RLK, PXC1, is a regulator of secondary wall formation correlated with the TDIF-PXY/TDR-WOX4 signaling pathway

(2013) Jiehua Wang et al.   BMC PLANT BIOLOGY

Pectin Methylesterase and Pectin Remodelling Differ in the Fibre Walls of Two Gossypium Species with Very Different Fibre Properties

(2013) Qinxiang Liu et al.   PLoS One

Comparative Investigation of Fourier Transform Infrared (FT-IR) Spectroscopy and X-ray Diffraction (XRD) in the Determination of Cotton Fiber Crystallinity

(2012) Yongliang Liu et al.   APPLIED SPECTROSCOPY

CHITINASE-LIKE1/POM-POM1 and Its Homolog CTL2 Are Glucan-Interacting Proteins Important for Cellulose Biosynthesis in Arabidopsis

(2012) C. Sanchez-Rodriguez et al.   PLANT CELL

Dual-Level Regulation of ACC Synthase Activity by MPK3/MPK6 Cascade and Its Downstream WRKY Transcription Factor during Ethylene Induction in Arabidopsis

(2012) Guojing Li et al.   PLoS Genetics

Cotton fiber: a powerful single-cell model for cell wall and cellulose research

(2012) Candace H. Haigler et al.   Frontiers in Plant Science

MYB46 and MYB83 Bind to the SMRE Sites and Directly Activate a Suite of Transcription Factors and Secondary Wall Biosynthetic Genes

(2011) Ruiqin Zhong et al.   PLANT AND CELL PHYSIOLOGY

Overexpression of GhSusA1 increases plant biomass and improves cotton fiber yield and quality

(2011) Yanjie Jiang et al.   PLANT BIOTECHNOLOGY JOURNAL

PlaNet: Combined Sequence and Expression Comparisons across Plant Networks Derived from Seven Species

(2011) M. Mutwil et al.   PLANT CELL

Cellulose synthesis via the FEI2 RLK/SOS5 pathway and CELLULOSE SYNTHASE 5 is required for the structure of seed coat mucilage in Arabidopsis

(2011) Smadar Harpaz-Saad et al.   PLANT JOURNAL

Characterization of the plasma membrane proteins and receptor-like kinases associated with secondary vascular differentiation in poplar

(2011) Dongliang Song et al.   PLANT MOLECULAR BIOLOGY

Development of Fourier transform infrared spectroscopy in direct, non-destructive, and rapid determination of cotton fiber maturity

(2011) Yongliang Liu et al.   TEXTILE RESEARCH JOURNAL

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Fast and SNP-tolerant detection of complex variants and splicing in short reads

(2010) T. D. Wu et al.   BIOINFORMATICS

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

The Arabidopsis cysteine-rich protein GASA4 promotes GA responses and exhibits redox activity in bacteria and in planta

(2010) Lior Rubinovich et al.   PLANT JOURNAL

Functional analysis of Gossypium hirsutum cellulose synthase catalytic subunit 4 promoter in transgenic Arabidopsis and cotton tissues

(2010) Hee Jin Kim et al.   PLANT SCIENCE

Xyloglucan endotransglycosylase/hydrolase genes in cotton and their role in fiber elongation

(2010) Joohyun Lee et al.   PLANTA

Near-isogenic cotton germplasm lines that differ in fiber-bundle strength have temporal differences in fiber gene expression patterns as revealed by comparative high-throughput profiling

(2010) Doug J. Hinchliffe et al.   THEORETICAL AND APPLIED GENETICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Receptor-like kinases shape the plant

(2009) Ive De Smet et al.   NATURE CELL BIOLOGY

A Specialized Outer Layer of the Primary Cell Wall Joins Elongating Cotton Fibers into Tissue-Like Bundles

(2009) B. Singh et al.   PLANT PHYSIOLOGY

BioVenn – a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams

(2008) Tim Hulsen et al.   BMC GENOMICS

Two Leucine-Rich Repeat Receptor Kinases Mediate Signaling, Linking Cell Wall Biosynthesis and ACC Synthase in Arabidopsis

(2008) S.-L. Xu et al.   PLANT CELL