Repeat Composition of CenH3-chromatin and H3K9me2-marked heterochromatin in Sugar Beet (Beta vulgaris)

Diversification, evolution and methylation of short interspersed nuclear element families in sugar beet and related Amaranthaceae species

(2016) Katrin Schwichtenberg et al.   PLANT JOURNAL

Repetitive sequence analysis and karyotyping reveals centromere-associated DNA sequences in radish (Raphanus sativus L.)

(2015) Qunyan He et al.   BMC PLANT BIOLOGY

Stable Patterns of CENH3 Occupancy Through Maize Lineages Containing Genetically Similar Centromeres

(2015) Jonathan I. Gent et al.   GENETICS

Sequential de novo centromere formation and inactivation on a chromosomal fragment in maize

(2015) Yalin Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Stable Patterns of CENH3 Occupancy Through Maize Lineages Containing Genetically Similar Centromeres

(2015) Jonathan I. Gent et al.   GENETICS

Cytosine Methylation of an Ancient Satellite Family in the Wild Beet Beta procumbens

(2014) Martin Schmidt et al.   CYTOGENETIC AND GENOME RESEARCH

Identification of the centromere-specific histone H3 variant in Lotus japonicus

(2014) Ahmet L. Tek et al.   GENE

Accessible DNA and Relative Depletion of H3K9me2 at Maize Loci Undergoing RNA-Directed DNA Methylation

(2014) Jonathan I. Gent et al.   PLANT CELL

Profiling of extensively diversified plant LINEs reveals distinct plant-specific subclades

(2014) Tony Heitkam et al.   PLANT JOURNAL

The CHH motif in sugar beet satellite DNA: a modulator for cytosine methylation

(2014) Falk Zakrzewski et al.   PLANT JOURNAL

Genomic Distribution of H3K9me2 and DNA Methylation in a Maize Genome

(2014) Patrick T. West et al.   PLoS One

Comparative molecular cytogenetic analyses of a major tandemly repeated DNA family and retrotransposon sequences in cultivated jute Corchorus species (Malvaceae)

(2013) Rabeya Begum et al.   ANNALS OF BOTANY

RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads

(2013) P. Novak et al.   BIOINFORMATICS

Cytoplasmic Organelle DNA Preferentially Inserts into Open Chromatin

(2013) Dong Wang et al.   Genome Biology and Evolution

Maize centromeres expand and adopt a uniform size in the genetic background of oat

(2013) K. Wang et al.   GENOME RESEARCH

The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)

(2013) Juliane C. Dohm et al.   NATURE

Formation of a Functional Maize Centromere after Loss of Centromeric Sequences and Gain of Ectopic Sequences

(2013) B. Zhang et al.   PLANT CELL

The CentO satellite confers translational and rotational phasing on cenH3 nucleosomes in rice centromeres

(2013) T. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

De novo centromere formation on a chromosome fragment in maize

(2013) S. Fu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution

(2013) Daniël P Melters et al.   GENOME BIOLOGY

Highly diverse chromoviruses of Beta vulgaris are classified by chromodomains and chromosomal integration

(2013) Beatrice Weber et al.   Mobile DNA

Repeatless and Repeat-Based Centromeres in Potato: Implications for Centromere Evolution

(2012) Z. Gong et al.   PLANT CELL

A sugar beet (Beta vulgarisL.) reference FISH karyotype for chromosome and chromosome-arm identification, integration of genetic linkage groups and analysis of major repeat family distribution

(2012) Susanne Paesold et al.   PLANT JOURNAL

Evolutionary reshuffling in the Errantivirus lineage Elbe within theBeta vulgarisgenome

(2012) Cora Wollrab et al.   PLANT JOURNAL

Survey of sugar beet (Beta vulgaris L.) hAT transposons and MITE-like hATpin derivatives

(2012) Gerhard Menzel et al.   PLANT MOLECULAR BIOLOGY

Stretching the Rules: Monocentric Chromosomes with Multiple Centromere Domains

(2012) Pavel Neumann et al.   PLoS Genetics

Epigenetic profiling of heterochromatic satellite DNA

(2011) Falk Zakrzewski et al.   CHROMOSOMA

Characterization of CENH3 proteins and centromere-associated DNA sequences in diploid and allotetraploid Brassica species

(2011) Guixiang Wang et al.   CHROMOSOMA

Functional centromeres in Astragalus sinicus include a compact centromere-specific histone H3 and a 20-bp tandem repeat

(2011) Ahmet L. Tek et al.   CHROMOSOME RESEARCH

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

(2011) François Roudier et al.   EMBO JOURNAL

Evaluation of next-generation sequencing software in mapping and assembly

(2011) Suying Bao et al.   JOURNAL OF HUMAN GENETICS

Strong epigenetic similarity between maize centromeric and pericentromeric regions at the level of small RNAs, DNA methylation and H3 chromatin modifications

(2011) Jonathan I. Gent et al.   NUCLEIC ACIDS RESEARCH

Knockdown of CENH3 in Arabidopsis reduces mitotic divisions and causes sterility by disturbed meiotic chromosome segregation

(2011) Inna Lermontova et al.   PLANT JOURNAL

Plant centromeric retrotransposons: a structural and cytogenetic perspective

(2011) Pavel Neumann et al.   Mobile DNA

Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data

(2010) Petr Novák et al.   BMC BIOINFORMATICS

Analysis of a c0t-1 library enables the targeted identification of minisatellite and satellite families in Beta vulgaris

(2010) Falk Zakrzewski et al.   BMC PLANT BIOLOGY

Functional centromeres in soybean include two distinct tandem repeats and a retrotransposon

(2010) Ahmet L. Tek et al.   CHROMOSOME RESEARCH

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

(2010) Julie A. Law et al.   NATURE REVIEWS GENETICS

Identity ofTetragonia pentandraand taxonomy and distribution ofPatellifolia (Chenopodiaceae)

(2010) Mats Thulin et al.   Willdenowia

Major Evolutionary Transitions in Centromere Complexity

(2009) Harmit S. Malik et al.   CELL

Nested Ty3-gypsy retrotransposons of a single Beta procumbens centromere contain a putative chromodomain

(2009) Beatrice Weber et al.   CHROMOSOME RESEARCH

The Ty1-copia families SALIRE and Cotzilla populating the Beta vulgaris genome show remarkable differences in abundance, chromosomal distribution, and age

(2009) Beatrice Weber et al.   CHROMOSOME RESEARCH

ChIP–seq: advantages and challenges of a maturing technology

(2009) Peter J. Park   NATURE REVIEWS GENETICS

Maize Centromere Structure and Evolution: Sequence Analysis of Centromeres 2 and 5 Reveals Dynamic Loci Shaped Primarily by Retrotransposons

(2009) Thomas K. Wolfgruber et al.   PLoS Genetics

Diversity of a Complex Centromeric Satellite and Molecular Characterization of Dispersed Sequence Families in Sugar Beet (Beta vulgaris)

(2008) Gerhard Menzel et al.   ANNALS OF BOTANY

Histone modifications associated with both A and B chromosomes of maize

(2008) Weiwei Jin et al.   CHROMOSOME RESEARCH

Epigenetic regulation of heterochromatic DNA stability

(2008) Jamy C Peng et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT