标题
A transcriptional blueprint for a spiral-cleaving embryo
作者
关键词
Spiral cleavage, Lophotrochozoan, Annelid, Transcriptome, Maternal contribution, Zygotic transcription
出版物
BMC GENOMICS
Volume 17, Issue 1, Pages -
出版商
Springer Nature
发表日期
2016-08-05
DOI
10.1186/s12864-016-2860-6
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- De Novo assembly and annotation of the freshwater crayfish Astacus astacus transcriptome
- (2016) Kathrin Theissinger et al. Marine Genomics
- The mid-developmental transition and the evolution of animal body plans
- (2016) Michal Levin et al. NATURE
- Current status of annelid phylogeny
- (2016) Anne Weigert et al. ORGANISMS DIVERSITY & EVOLUTION
- BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
- (2015) Felipe A. Simão et al. BIOINFORMATICS
- Transcriptome sequencing and annotation of the polychaete Hermodice carunculata (Annelida, Amphinomidae)
- (2015) Shaadi Mehr et al. BMC GENOMICS
- Spiralian Phylogeny Informs the Evolution of Microscopic Lineages
- (2015) Christopher E. Laumer et al. CURRENT BIOLOGY
- The Evolution of Annelids Reveals Two Adaptive Routes to the Interstitial Realm
- (2015) Torsten Hugo Struck et al. CURRENT BIOLOGY
- Phylogenomic Insights into Animal Evolution
- (2015) Maximilian J. Telford et al. CURRENT BIOLOGY
- MED GATA factors promote robust development of the C. elegans endoderm
- (2015) Morris F. Maduro et al. DEVELOPMENTAL BIOLOGY
- Reinforcing the Egg-Timer: Recruitment of Novel Lophotrochozoa Homeobox Genes to Early and Late Development in the Pacific Oyster
- (2015) Jordi Paps et al. Genome Biology and Evolution
- High-throughput spatial mapping of single-cell RNA-seq data to tissue of origin
- (2015) Kaia Achim et al. NATURE BIOTECHNOLOGY
- FlyBase: establishing a Gene Group resource forDrosophila melanogaster
- (2015) Helen Attrill et al. NUCLEIC ACIDS RESEARCH
- Structure, phylogeny, and expression of the frizzled-related gene family in the lophotrochozoan annelid Platynereis dumerilii
- (2015) Benjamin R. Bastin et al. EvoDevo
- Variation in spiralian development: insights from polychaetes
- (2015) Elaine C. Seaver INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY
- Spiralian model systems
- (2015) Jonathan Q. Henry INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY
- Expression of the wnt gene complement in a spiral-cleaving embryo and trochophore larva
- (2015) Margaret M. Pruitt et al. INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY
- Zygotic Genome Activation During the Maternal-to-Zygotic Transition
- (2014) Miler T. Lee et al. Annual Review of Cell and Developmental Biology
- Animal Phylogeny and Its Evolutionary Implications
- (2014) Casey W. Dunn et al. Annual Review of Ecology Evolution and Systematics
- Platynereis dumerilii
- (2014) Florian Raible et al. CURRENT BIOLOGY
- Transcription in Pronuclei and One- to Four-Cell Embryos Drives Early Development in a Nematode
- (2014) Jianbin Wang et al. CURRENT BIOLOGY
- High-resolution analysis of gene activity during the Xenopus mid-blastula transition
- (2014) Clara Collart et al. DEVELOPMENT
- Genetic and Genomic Tools for the Marine Annelid Platynereis dumerilii
- (2014) Juliane Zantke et al. GENETICS
- Illuminating the Base of the Annelid Tree Using Transcriptomics
- (2014) Anne Weigert et al. MOLECULAR BIOLOGY AND EVOLUTION
- Maternal Inheritance of Twist and Analysis of MAPK Activation in Embryos of the Polychaete Annelid Platynereis dumerilii
- (2014) Kathrin Pfeifer et al. PLoS One
- The Earliest Transcribed Zygotic Genes Are Short, Newly Evolved, and Different across Species
- (2014) Patricia Heyn et al. Cell Reports
- A genome-wide survey of maternal and embryonic transcripts during Xenopus tropicalis development
- (2013) Sarita S Paranjpe et al. BMC GENOMICS
- Identification of the zebrafish maternal and paternal transcriptomes
- (2013) Steven A. Harvey et al. DEVELOPMENT
- Inferring the choreography of parental genomes during fertilization from ultralarge-scale whole-transcriptome analysis
- (2013) S.-J. Park et al. GENES & DEVELOPMENT
- Mesoteloblast-Like Mesodermal Stem Cells in the Polychaete AnnelidPlatynereis dumerilii(Nereididae)
- (2013) Antje H.L. Fischer et al. JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION
- Nanog, Pou5f1 and SoxB1 activate zygotic gene expression during the maternal-to-zygotic transition
- (2013) Miler T. Lee et al. NATURE
- Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing
- (2013) Zhigang Xue et al. NATURE
- De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
- (2013) Brian J Haas et al. Nature Protocols
- The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
- (2013) Henrik Nordberg et al. NUCLEIC ACIDS RESEARCH
- Data, information, knowledge and principle: back to metabolism in KEGG
- (2013) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- Ensembl 2014
- (2013) Paul Flicek et al. NUCLEIC ACIDS RESEARCH
- An Essential Role for Zygotic Expression in the Pre-Cellular Drosophila Embryo
- (2013) Zehra Ali-Murthy et al. PLoS Genetics
- Scaffolding low quality genomes using orthologous protein sequences
- (2012) Y. I. Li et al. BIOINFORMATICS
- The oyster genome reveals stress adaptation and complexity of shell formation
- (2012) Guofan Zhang et al. NATURE
- Insights into bilaterian evolution from three spiralian genomes
- (2012) Oleg Simakov et al. NATURE
- Composite transcriptome assembly of RNA-seq data in a sheep model for delayed bone healing
- (2011) Marten Jäger et al. BMC GENOMICS
- Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition
- (2011) Håvard Aanes et al. GENOME RESEARCH
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- KEGG for integration and interpretation of large-scale molecular data sets
- (2011) M. Kanehisa et al. NUCLEIC ACIDS RESEARCH
- The Pfam protein families database
- (2011) M. Punta et al. NUCLEIC ACIDS RESEARCH
- Profiling by Image Registration Reveals Common Origin of Annelid Mushroom Bodies and Vertebrate Pallium
- (2010) Raju Tomer et al. CELL
- Characterizing the Embryonic Transcriptome of the Snail Ilyanassa
- (2010) J. D. Lambert et al. INTEGRATIVE AND COMPARATIVE BIOLOGY
- Differential Localization of mRNAs During Early Development in the Mollusc, Crepidula fornicata
- (2010) Jonathan J. Henry et al. INTEGRATIVE AND COMPARATIVE BIOLOGY
- A Twist in Time--The Evolution of Spiral Cleavage in the Light of Animal Phylogeny
- (2010) A. Hejnol INTEGRATIVE AND COMPARATIVE BIOLOGY
- Evolutionary Dynamics of the wnt Gene Family: A Lophotrochozoan Perspective
- (2010) S.-J. Cho et al. MOLECULAR BIOLOGY AND EVOLUTION
- A scaling normalization method for differential expression analysis of RNA-seq data
- (2010) Mark D Robinson et al. GENOME BIOLOGY
- RNA-Seq gene expression estimation with read mapping uncertainty
- (2009) Bo Li et al. BIOINFORMATICS
- Features of the ancestral bilaterian inferred from Platynereis dumerilii ParaHox genes
- (2009) Jerome HL Hui et al. BMC BIOLOGY
- The evolution of protostome GATA factors: Molecular phylogenetics, synteny, and intron/exon structure reveal orthologous relationships
- (2009) William Q Gillis et al. BMC EVOLUTIONARY BIOLOGY
- The genome of the blood fluke Schistosoma mansoni
- (2009) Matthew Berriman et al. NATURE
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- The genome of the model beetle and pest Tribolium castaneum
- (2008) Stephen Richards et al. NATURE
- Assessing the gene space in draft genomes
- (2008) Genis Parra et al. NUCLEIC ACIDS RESEARCH
- SpBase: the sea urchin genome database and web site
- (2008) R. A. Cameron et al. NUCLEIC ACIDS RESEARCH
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now