Comparative analysis of taxonomic, functional, and metabolic patterns of microbiomes from 14 full-scale biogas reactors by metagenomic sequencing and radioisotopic analysis

Presence and Role of Anaerobic Hydrolytic Microbes in Conversion of Lignocellulosic Biomass for Biogas Production

(2015) Samet Azman et al.   CRITICAL REVIEWS IN ENVIRONMENTAL SCIENCE AND TECHNOLOGY

Comparing the inhibitory thresholds of dairy manure co-digesters after prolonged acclimation periods: Part 2 – correlations between microbiomes and environment

(2015) Leticia Regueiro et al.   WATER RESEARCH

Ammonia and temperature determine potential clustering in the anaerobic digestion microbiome

(2015) Jo De Vrieze et al.   WATER RESEARCH

Metaproteomics of complex microbial communities in biogas plants

(2015) Robert Heyer et al.   Microbial Biotechnology

Metagenomic analysis of sludge from full-scale anaerobic digesters operated in municipal wastewater treatment plants

(2014) Ying Yang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

A metagenomic study of the microbial communities in four parallel biogas reactors

(2014) Linn Solli et al.   Biotechnology for Biofuels

Bioaugmentation as a Solution To Increase Methane Production from an Ammonia-Rich Substrate

(2014) Ioannis A. Fotidis et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Ecology of Testate Amoebae in an Amazonian Peatland and Development of a Transfer Function for Palaeohydrological Reconstruction

(2014) Graeme T. Swindles et al.   MICROBIAL ECOLOGY

Analysis of bacterial communities and bacterial pathogens in a biogas plant by the combination of ethidium monoazide, PCR and Ion Torrent sequencing

(2014) Gang Luo et al.   WATER RESEARCH

Influence of transitional states on the microbial ecology of anaerobic digesters treating solid wastes

(2013) Leticia Regueiro et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Methanosarcina domination in anaerobic sequencing batch reactor at short hydraulic retention time

(2013) Jingwei Ma et al.   BIORESOURCE TECHNOLOGY

A pyrosequencing-based metagenomic study of methane-producing microbial community in solid-state biogas reactor

(2013) An Li et al.   Biotechnology for Biofuels

454 pyrosequencing analyses of bacterial and archaeal richness in 21 full-scale biogas digesters

(2013) Carina Sundberg et al.   FEMS MICROBIOLOGY ECOLOGY

The dominant acetate degradation pathway/methanogenic composition in full-scale anaerobic digesters operating under different ammonia levels

(2013) I. A. Fotidis et al.   International Journal of Environmental Science and Technology

Synergetic stress of acids and ammonium on the shift in the methanogenic pathways during thermophilic anaerobic digestion of organics

(2013) Fan Lü et al.   WATER RESEARCH

Metagenomic analysis on seasonal microbial variations of activated sludge from a full-scale wastewater treatment plant over 4 years

(2013) Feng Ju et al.   Environmental Microbiology Reports

Methanosarcina: The rediscovered methanogen for heavy duty biomethanation

(2012) Jo De Vrieze et al.   BIORESOURCE TECHNOLOGY

Microbial Structures, Functions, and Metabolic Pathways in Wastewater Treatment Bioreactors Revealed Using High-Throughput Sequencing

(2012) Lin Ye et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Structure, fluctuation and magnitude of a natural grassland soil metagenome

(2012) Tom O Delmont et al.   ISME Journal

Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing

(2012) Martha Zakrzewski et al.   JOURNAL OF BIOTECHNOLOGY

Cross-biome metagenomic analyses of soil microbial communities and their functional attributes

(2012) N. Fierer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Advancing analytical algorithms and pipelines for billions of microbial sequences

(2011) Antonio Gonzalez et al.   CURRENT OPINION IN BIOTECHNOLOGY

Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis

(2011) Matthew B. Scholz et al.   CURRENT OPINION IN BIOTECHNOLOGY

Anaerobic digestion from the viewpoint of microbiological, chemical, and operational aspects — a review

(2011) T. Amani et al.   ENVIRONMENTAL REVIEWS

Pathogenic Bacteria in Sewage Treatment Plants as Revealed by 454 Pyrosequencing

(2011) Lin Ye et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

(2011) Noah Fierer et al.   ISME Journal

Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing

(2011) Sebastian Jaenicke et al.   PLoS One

Bacterial community structures are unique and resilient in full-scale bioenergy systems

(2011) J. J. Werner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans

(2011) B. D. Muegge et al.   SCIENCE

Metagenomic Analyses: Past and Future Trends

(2010) Carola Simon et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparative study of mechanical, hydrothermal, chemical and enzymatic treatments of digested biofibers to improve biogas production

(2010) Emiliano Bruni et al.   BIORESOURCE TECHNOLOGY

Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara

(2010) Achim Quaiser et al.   ISME Journal

The Taxonomic and Functional Diversity of Microbes at a Temperate Coastal Site: A ‘Multi-Omic’ Study of Seasonal and Diel Temporal Variation

(2010) Jack A. Gilbert et al.   PLoS One

Contrasts between habitat generalists and specialists: an empirical extension to the basic metacommunity framework

(2009) Shubha N. Pandit et al.   ECOLOGY

Towards the definition of a core of microorganisms involved in anaerobic digestion of sludge

(2009) Delphine Rivière et al.   ISME Journal

Syntrophorhabdus aromaticivorans gen. nov., sp. nov., the First Cultured Anaerobe Capable of Degrading Phenol to Acetate in Obligate Syntrophic Associations with a Hydrogenotrophic Methanogen

(2008) Y.-L. Qiu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Influence of organic loading rate and hydraulic retention time on the performance, stability and microbial communities of one-stage anaerobic digestion of two-phase olive mill solid residue

(2008) B. Rincón et al.   BIOCHEMICAL ENGINEERING JOURNAL

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology

(2008) Andreas Schlüter et al.   JOURNAL OF BIOTECHNOLOGY

Serial CSTR digester configuration for improving biogas production from manure

(2008) Kanokwan Boe et al.   WATER RESEARCH