Expression and chromatin structures of cellulolytic enzyme gene regulated by heterochromatin protein 1

Secretome analysis of Trichoderma reesei and Aspergillus niger cultivated by submerged and sequential fermentation processes: Enzyme production for sugarcane bagasse hydrolysis

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Redesigning the regulatory pathway to enhance cellulase production in Penicillium oxalicum

(2015) Guangshan Yao et al.   Biotechnology for Biofuels

The impact of chromatin remodelling on cellulase expression in Trichoderma reesei

(2015) Thiago M. Mello-de-Sousa et al.   BMC GENOMICS

The Pfam protein families database: towards a more sustainable future

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Highly condensed chromatins are formed adjacent to subtelomeric and decondensed silent chromatin in fission yeast

(2015) Atsushi Matsuda et al.   Nature Communications

Synergistic and Dose-Controlled Regulation of Cellulase Gene Expression in Penicillium oxalicum

(2015) Zhonghai Li et al.   PLoS Genetics

A truncated form of the Carbon catabolite repressor 1 increases cellulase production in Trichoderma reesei

(2014) Thiago M Mello-de-Sousa et al.   Biotechnology for Biofuels

Defining the genome-wide role of CRE1 during carbon catabolite repression in Trichoderma reesei using RNA-Seq analysis

(2014) Amanda Cristina Campos Antoniêto et al.   FUNGAL GENETICS AND BIOLOGY

The VELVET A Orthologue VEL1 of Trichoderma reesei Regulates Fungal Development and Is Essential for Cellulase Gene Expression

(2014) Razieh Karimi Aghcheh et al.   PLoS One

Penicillium decumbens BrlA extensively regulates secondary metabolism and functionally associates with the expression of cellulase genes

(2013) Yuqi Qin et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The role of CRE1 in nucleosome positioning within the cbh1 promoter and coding regions of Trichoderma reesei

(2013) L. Ries et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Promotion of extracellular lignocellulolytic enzymes production by restraining the intracellular β-glucosidase in Penicillium decumbens

(2013) Mei Chen et al.   BIORESOURCE TECHNOLOGY

Trichoderma reesei Histone Acetyltransferase Gcn5 Regulates Fungal Growth, Conidiation, and Cellulase Gene Expression

(2013) Qi Xin et al.   CURRENT MICROBIOLOGY

Dynamic regulation of transcriptional states by chromatin and transcription factors

(2013) Ty C. Voss et al.   NATURE REVIEWS GENETICS

Genomic and Secretomic Analyses Reveal Unique Features of the Lignocellulolytic Enzyme System of Penicillium decumbens

(2013) Guodong Liu et al.   PLoS One

Long-term strain improvements accumulate mutations in regulatory elements responsible for hyper-production of cellulolytic enzymes

(2013) Guodong Liu et al.   Scientific Reports

Deciphering Transcriptional Regulatory Mechanisms Associated with Hemicellulose Degradation in Neurospora crassa

(2012) Jianping Sun et al.   EUKARYOTIC CELL

The putative protein methyltransferase LAE1 controls cellulase gene expression in Trichoderma reesei

(2012) Bernhard Seiboth et al.   MOLECULAR MICROBIOLOGY

Conserved and essential transcription factors for cellulase gene expression in ascomycete fungi

(2012) S. T. Coradetti et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Correlation of gene expression and protein production rate - a system wide study

(2011) Mikko Arvas et al.   BMC GENOMICS

The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei: a master regulator of carbon assimilation

(2011) Thomas Portnoy et al.   BMC GENOMICS

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Role of Swi6/HP1 Self-association-mediated Recruitment of Clr4/Suv39 in Establishment and Maintenance of Heterochromatin in Fission Yeast

(2011) Swati Haldar et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

DNA methylation and the formation of heterochromatin in Neurospora crassa

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Telomere position effect is regulated by heterochromatin-associated proteins and NkuA in Aspergillus nidulans

(2010) J. M. Palmer et al.   MICROBIOLOGY-SGM

Heterochromatic marks are associated with the repression of secondary metabolism clusters in Aspergillus nidulans

(2010) Yazmid Reyes-Dominguez et al.   MOLECULAR MICROBIOLOGY

Functional characterization of Rho GTPases in Aspergillus niger uncovers conserved and diverged roles of Rho proteins within filamentous fungi

(2010) Min Jin Kwon et al.   MOLECULAR MICROBIOLOGY

Schizosaccharomyces pombe genome-wide nucleosome mapping reveals positioning mechanisms distinct from those of Saccharomyces cerevisiae

(2010) Alexandra B Lantermann et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Identification of specific binding sites for XYR1, a transcriptional activator of cellulolytic and xylanolytic genes in Trichoderma reesei

(2009) Takanori Furukawa et al.   FUNGAL GENETICS AND BIOLOGY

Systems analysis of plant cell wall degradation by the model filamentous fungus Neurospora crassa

(2009) Chaoguang Tian et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Balance between Distinct HP1 Family Proteins Controls Heterochromatin Assembly in Fission Yeast

(2008) M. Sadaie et al.   MOLECULAR AND CELLULAR BIOLOGY

Direct Interaction between DNA Methyltransferase DIM-2 and HP1 Is Required for DNA Methylation in Neurospora crassa

(2008) S. Honda et al.   MOLECULAR AND CELLULAR BIOLOGY

Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)

(2008) Diego Martinez et al.   NATURE BIOTECHNOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS