Cell-type–specific transcriptome and histone modification dynamics during cellular reprogramming in the Arabidopsis stomatal lineage

Molecular Mechanisms of Plant Regeneration

(2019) Momoko Ikeuchi et al.   Annual Review of Plant Biology

Causal role for inheritance of H3K27me3 in maintaining the OFF state of a Drosophila HOX gene

(2017) Rory T. Coleman et al.   SCIENCE

Temporal dynamics of gene expression and histone marks at the Arabidopsis shoot meristem during flowering

(2017) Yuan You et al.   Nature Communications

Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape

(2016) Ronan C. O’Malley et al.   CELL

Parental epigenetic asymmetry of PRC2‐mediated histone modifications in theArabidopsisendosperm

(2016) Jordi Moreno‐Romero et al.   EMBO JOURNAL

Concerted genomic targeting of H3K27 demethylase REF6 and chromatin-remodeling ATPase BRM in Arabidopsis

(2016) Chenlong Li et al.   NATURE GENETICS

Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation

(2016) Miguel de Lucas et al.   PLANT CELL

Transcriptome Dynamics of the Stomatal Lineage: Birth, Amplification, and Termination of a Self-Renewing Population

(2015) Jessika Adrian et al.   DEVELOPMENTAL CELL

Taranis Protects Regenerating Tissue from Fate Changes Induced by the Wound Response in Drosophila

(2015) Keaton J. Schuster et al.   DEVELOPMENTAL CELL

Two distinct modes for propagation of histone PTMs across the cell cycle

(2015) Constance Alabert et al.   GENES & DEVELOPMENT

Quantification of cell identity from single-cell gene expression profiles

(2015) Idan Efroni et al.   GENOME BIOLOGY

A Regulatory Framework for Shoot Stem Cell Control Integrating Metabolic, Transcriptional, and Phytohormone Signals

(2014) Christoph Schuster et al.   DEVELOPMENTAL CELL

Genome-wide characterization of the routes to pluripotency

(2014) Samer M. I. Hussein et al.   NATURE

Cuticular Wax Biosynthesis is Up-Regulated by the MYB94 Transcription Factor in Arabidopsis

(2014) Saet Buyl Lee et al.   PLANT AND CELL PHYSIOLOGY

Deep functional redundancy between FAMA and FOUR LIPS in stomatal development

(2014) EunKyoung Lee et al.   PLANT JOURNAL

Arabidopsis guard cell integrity involves the epigenetic stabilization of theFLPandFAMAtranscription factor genes

(2014) EunKyoung Lee et al.   PLANT JOURNAL

Direct roles of SPEECHLESS in the specification of stomatal self-renewing cells

(2014) O. S. Lau et al.   SCIENCE

Irreversible fate commitment in the Arabidopsis stomatal lineage requires a FAMA and RETINOBLASTOMA-RELATED module

(2014) Juliana L Matos et al.   eLife

H3K27 modifications define segmental regulatory domains in the Drosophila bithorax complex

(2014) Sarah K Bowman et al.   eLife

A blueprint for engineering cell fate: current technologies to reprogram cell identity

(2013) Samantha A Morris et al.   CELL RESEARCH

A Dof Transcription Factor, SCAP1, Is Essential for the Development of Functional Stomata in Arabidopsis

(2013) Juntaro Negi et al.   CURRENT BIOLOGY

Arabidopsis homeodomain-leucine zipper IV proteins promote stomatal development and ectopically induce stomata beyond the epidermis

(2013) K. M. Peterson et al.   DEVELOPMENT

Plant Callus: Mechanisms of Induction and Repression

(2013) M. Ikeuchi et al.   PLANT CELL

Mutations in epidermis-specific HD-ZIP IV genes affect floral organ identity inArabidopsis thaliana

(2013) Naoko Kamata et al.   PLANT JOURNAL

Epidermal identity is maintained by cell-cell communication via a universally active feedback loop inArabidopsis thaliana

(2013) Rita San-Bento et al.   PLANT JOURNAL

A Histone Mutant Reproduces the Phenotype Caused by Loss of Histone-Modifying Factor Polycomb

(2013) A. R. Pengelly et al.   SCIENCE

FIMO: scanning for occurrences of a given motif

(2011) Charles E. Grant et al.   BIOINFORMATICS

Reprogramming Factor Expression Initiates Widespread Targeted Chromatin Remodeling

(2011) Richard P. Koche et al.   Cell Stem Cell

Differentiation of Arabidopsis Guard Cells: Analysis of the Networks Incorporating the Basic Helix-Loop-Helix Transcription Factor, FAMA

(2011) C. Hachez et al.   PLANT PHYSIOLOGY

Dynamic Regulation of H3K27 Trimethylation during Arabidopsis Differentiation

(2011) Marcel Lafos et al.   PLoS Genetics

Polycomb Repressive Complex 2 Controls the Embryo-to-Seedling Phase Transition

(2011) Daniel Bouyer et al.   PLoS Genetics

Distinct Epigenomic Landscapes of Pluripotent and Lineage-Committed Human Cells

(2010) R. David Hawkins et al.   Cell Stem Cell

ESCs Require PRC2 to Direct the Successful Reprogramming of Differentiated Cells toward Pluripotency

(2010) Carlos F. Pereira et al.   Cell Stem Cell

Regional specification of stomatal production by the putative ligand CHALLAH

(2010) E. B. Abrash et al.   DEVELOPMENT

A Simple Method for Gene Expression and Chromatin Profiling of Individual Cell Types within a Tissue

(2010) Roger B. Deal et al.   DEVELOPMENTAL CELL

Arabidopsis Regeneration from Multiple Tissues Occurs via a Root Development Pathway

(2010) Kaoru Sugimoto et al.   DEVELOPMENTAL CELL

H3K27me3 Profiling of the Endosperm Implies Exclusion of Polycomb Group Protein Targeting by DNA Methylation

(2010) Isabelle Weinhofer et al.   PLoS Genetics

Fluorescence Activated Cell Sorting of Plant Protoplasts

(2010) Bastiaan O. R. Bargmann et al.   Jove-Journal of Visualized Experiments

Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana

(2009) Xiaoyu Zhang et al.   GENOME BIOLOGY

Retinoblastoma and Its Binding Partner MSI1 Control Imprinting in Arabidopsis

(2008) Pauline E Jullien et al.   PLOS BIOLOGY