Structure of an RNA aptamer in complex with the fluorophore tetramethylrhodamine

From fluorescent proteins to fluorogenic RNAs: Tools for imaging cellular macromolecules

(2019) Lynda Truong et al.   PROTEIN SCIENCE

Riboswitches for the alarmone ppGpp expand the collection of RNA-based signaling systems

(2018) Madeline E. Sherlock et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Guanidine-sensing riboswitches: How do they work and what do they regulate?

(2018) Robert A. Battaglia et al.   Wiley Interdisciplinary Reviews-RNA

NMR experiments for the rapid identification of P=O···H–X type hydrogen bonds in nucleic acids

(2017) Elke Duchardt-Ferner et al.   JOURNAL OF BIOMOLECULAR NMR

A Stably Protonated Adenine Nucleotide with a Highly Shifted pK a Value Stabilizes the Tertiary Structure of a GTP-Binding RNA Aptamer

(2016) Antje C. Wolter et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

NMR resonance assignments for the tetramethylrhodamine binding RNA aptamer 3 in complex with the ligand 5-carboxy-tetramethylrhodamine

(2016) Elke Duchardt-Ferner et al.   Biomolecular NMR Assignments

An intermolecular G-quadruplex as the basis for GTP recognition in the class V–GTP aptamer

(2016) Amir H. Nasiri et al.   RNA

Fluorophore-binding RNA aptamers and their applications

(2016) Elena V. Dolgosheina et al.   Wiley Interdisciplinary Reviews-RNA

What a Difference an OH Makes: Conformational Dynamics as the Basis for the Ligand Specificity of the Neomycin-Sensing Riboswitch

(2015) Elke Duchardt-Ferner et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

RNA Mango Aptamer-Fluorophore: A Bright, High-Affinity Complex for RNA Labeling and Tracking

(2014) Elena V. Dolgosheina et al.   ACS Chemical Biology

Structural, Functional, and Taxonomic Diversity of Three PreQ1 Riboswitch Classes

(2014) Phillip J. McCown et al.   CHEMISTRY & BIOLOGY

Efficient Detection of Hydrogen Bonds in Dynamic Regions of RNA by Sensitivity-Optimized NMR Pulse Sequences

(2013) Andre Dallmann et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

New approaches for sensing metabolites and proteins in live cells using RNA

(2013) Rita L Strack et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Individual Basepair Stability of DNA and RNA Studied by NMR-Detected Solvent Exchange

(2012) Hannah S. Steinert et al.   BIOPHYSICAL JOURNAL

Rapid Identification of Noncanonical RNA Structure Elements by Direct Detection of OH⋅⋅⋅OP, NH⋅⋅⋅OP, and NH2⋅⋅⋅OP Hydrogen Bonds in Solution NMR Spectroscopy

(2011) Elke Duchardt-Ferner et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

RNA Mimics of Green Fluorescent Protein

(2011) J. S. Paige et al.   SCIENCE

Highly Modular Structure and Ligand Binding by Conformational Capture in a Minimalistic Riboswitch

(2010) Elke Duchardt-Ferner et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Selecting RNA aptamers for synthetic biology: investigating magnesium dependence and predicting binding affinity

(2010) James M. Carothers et al.   NUCLEIC ACIDS RESEARCH

The Structural and Functional Diversity of Metabolite-Binding Riboswitches

(2009) Adam Roth et al.   Annual Review of Biochemistry

DAMMIF, a program for rapidab-initioshape determination in small-angle scattering

(2009) Daniel Franke et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

High-resolution NMR structure of an RNA model system: the 14-mer cUUCGg tetraloop hairpin RNA

(2009) Senada Nozinovic et al.   NUCLEIC ACIDS RESEARCH

Riboswitches that sense S-adenosylmethionine and S-adenosylhomocysteineThis paper is one of a selection of papers published in this Special Issue, entitled CSBMCB — Systems and Chemical Biology, and has undergone the Journal's usual peer review process.

(2008) Joy Xin Wang et al.   Biochemistry and Cell Biology