标题
PmiREN: a comprehensive encyclopedia of plant miRNAs
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume -, Issue -, Pages -
出版商
Oxford University Press (OUP)
发表日期
2019-10-10
DOI
10.1093/nar/gkz894
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- psRNATarget: a plant small RNA target analysis server (2017 release)
- (2018) Xinbin Dai et al. NUCLEIC ACIDS RESEARCH
- Revisiting Criteria for Plant MicroRNA Annotation in the Era of Big Data
- (2018) Michael J. Axtell et al. PLANT CELL
- miRDeep-P2: accurate and fast analysis of the microRNA transcriptome in plants
- (2018) Zheng Kuang et al. BIOINFORMATICS
- miRBase: from microRNA sequences to function
- (2018) Ana Kozomara et al. NUCLEIC ACIDS RESEARCH
- MicroRNA and Transcription Factor: Key Players in Plant Regulatory Network
- (2017) Abdul F. A. Samad et al. Frontiers in Plant Science
- Functional and evolutionary analyses of the miR156 and miR529 families in land plants
- (2016) Edna Gicela Ortiz Morea et al. BMC PLANT BIOLOGY
- Assembly: a resource for assembled genomes at NCBI
- (2015) Paul A. Kitts et al. NUCLEIC ACIDS RESEARCH
- miR-PREFeR: an accurate, fast and easy-to-use plant miRNA prediction tool using small RNA-Seq data
- (2014) Jikai Lei et al. BIOINFORMATICS
- PNRD: a plant non-coding RNA database
- (2014) Xin Yi et al. NUCLEIC ACIDS RESEARCH
- Evolutionary history of plant microRNAs
- (2014) Richard S. Taylor et al. TRENDS IN PLANT SCIENCE
- Rapid construction of parallel analysis of RNA end (PARE) libraries for Illumina sequencing
- (2013) Jixian Zhai et al. METHODS
- Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs
- (2013) K. Rogers et al. PLANT CELL
- NCBI GEO: archive for functional genomics data sets—update
- (2012) Tanya Barrett et al. NUCLEIC ACIDS RESEARCH
- MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
- (2012) Y. Wang et al. NUCLEIC ACIDS RESEARCH
- Functions of microRNAs in plant stress responses
- (2012) Ramanjulu Sunkar et al. TRENDS IN PLANT SCIENCE
- Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants
- (2011) Basel Khraiwesh et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- miRDeep-P: a computational tool for analyzing the microRNA transcriptome in plants
- (2011) Xiaozeng Yang et al. BIOINFORMATICS
- Global analysis of gene-level microRNA expression in Arabidopsis using deep sequencing data
- (2011) Xiaozeng Yang et al. GENOMICS
- Phytozome: a comparative platform for green plant genomics
- (2011) David M. Goodstein et al. NUCLEIC ACIDS RESEARCH
- The sequence read archive: explosive growth of sequencing data
- (2011) Y. Kodama et al. NUCLEIC ACIDS RESEARCH
- Vive la différence: biogenesis and evolution of microRNAs in plants and animals
- (2011) Michael J Axtell et al. GENOME BIOLOGY
- PmiRKB: a plant microRNA knowledge base
- (2010) Y. Meng et al. NUCLEIC ACIDS RESEARCH
- MicroRNAs with macro-effects on plant stress responses
- (2010) Ramanjulu Sunkar SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
- miR156-Regulated SPL Transcription Factors Define an Endogenous Flowering Pathway in Arabidopsis thaliana
- (2009) Jia-Wei Wang et al. CELL
- The Sequential Action of miR156 and miR172 Regulates Developmental Timing in Arabidopsis
- (2009) Gang Wu et al. CELL
- Origin, Biogenesis, and Activity of Plant MicroRNAs
- (2009) Olivier Voinnet CELL
- MicroRNAs: Target Recognition and Regulatory Functions
- (2009) David P. Bartel CELL
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome
- (2009) Marcelo A German et al. Nature Protocols
- Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana
- (2009) Leonardo Alves-Junior et al. NUCLEIC ACIDS RESEARCH
- PMRD: plant microRNA database
- (2009) Zhenhai Zhang et al. NUCLEIC ACIDS RESEARCH
- CleaveLand: a pipeline for using degradome data to find cleaved small RNA targets
- (2008) C. Addo-Quaye et al. BIOINFORMATICS
- Discovering microRNAs from deep sequencing data using miRDeep
- (2008) Marc R Friedländer et al. NATURE BIOTECHNOLOGY
- Criteria for Annotation of Plant MicroRNAs
- (2008) B. C. Meyers et al. PLANT CELL
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started