标题
Detecting contamination in viromes using ViromeQC
作者
关键词
-
出版物
NATURE BIOTECHNOLOGY
Volume 37, Issue 12, Pages 1408-1412
出版商
Springer Science and Business Media LLC
发表日期
2019-11-21
DOI
10.1038/s41587-019-0334-5
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Numerous cultivated and uncultivated viruses encode ribosomal proteins
- (2019) Carolina M. Mizuno et al. Nature Communications
- Bacteriophages of the Human Gut: The “Known Unknown” of the Microbiome
- (2019) Andrey N. Shkoporov et al. Cell Host & Microbe
- Diversity of DNA and RNA Viruses in Indoor Air As Assessed via Metagenomic Sequencing
- (2018) Karyna Rosario et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Viromes of one year old infants reveal the impact of birth mode on microbiome diversity
- (2018) Angela McCann et al. PeerJ
- Reproducible protocols for metagenomic analysis of human faecal phageomes
- (2018) Andrey N. Shkoporov et al. Microbiome
- Shotgun metagenomics, from sampling to analysis
- (2017) Christopher Quince et al. NATURE BIOTECHNOLOGY
- Accessible, curated metagenomic data through ExperimentHub
- (2017) Edoardo Pasolli et al. NATURE METHODS
- VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data
- (2017) Jie Ren et al. Microbiome
- Assessment of a metaviromic dataset generated from nearshore Lake Michigan
- (2016) Siobhan C. Watkins et al. MARINE AND FRESHWATER RESEARCH
- Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
- (2016) Simon Roux et al. NATURE
- MetaMLST: multi-locus strain-level bacterial typing from metagenomic samples
- (2016) Moreno Zolfo et al. NUCLEIC ACIDS RESEARCH
- Transmission of viruses via our microbiomes
- (2016) Melissa Ly et al. Microbiome
- Metagenomic Investigation of Viral Communities in Ballast Water
- (2015) Yiseul Kim et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Gut DNA viromes of Malawian twins discordant for severe acute malnutrition
- (2015) Alejandro Reyes et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Human Skin Double-Stranded DNA Virome: Topographical and Temporal Diversity, Genetic Enrichment, and Dynamic Associations with the Host Microbiome
- (2015) Geoffrey D. Hannigan et al. mBio
- VirSorter: mining viral signal from microbial genomic data
- (2015) Simon Roux et al. PeerJ
- Generating viral metagenomes from the coral holobiont
- (2014) Karen D. Weynberg et al. Frontiers in Microbiology
- Rapid evolution of the human gut virome
- (2013) S. Minot et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Assessment of viral community functional potential from viral metagenomes may be hampered by contamination with cellular sequences
- (2013) S. Roux et al. Open Biology
- Dynamic Viral Populations in Hypersaline Systems as Revealed by Metagenomic Assembly
- (2012) Joanne B. Emerson et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Phylogenomic analysis of bacterial and archaeal sequences with AMPHORA2
- (2012) Martin Wu et al. BIOINFORMATICS
- Assessing the Diversity and Specificity of Two Freshwater Viral Communities through Metagenomics
- (2012) Simon Roux et al. PLoS One
- The human gut virome: Inter-individual variation and dynamic response to diet
- (2011) S. Minot et al. GENOME RESEARCH
- Viruses in the faecal microbiota of monozygotic twins and their mothers
- (2010) Alejandro Reyes et al. NATURE
- The Sequence Read Archive
- (2010) R. Leinonen et al. NUCLEIC ACIDS RESEARCH
- Cryptic prophages help bacteria cope with adverse environments
- (2010) Xiaoxue Wang et al. Nature Communications
- Laboratory procedures to generate viral metagenomes
- (2009) Rebecca V Thurber et al. Nature Protocols
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