Expression profiles of cell-wall related genes vary broadly between two common maize inbreds during stem development

Glycome and proteome components of Golgi membranes are common between two angiosperms with distinct cell wall structures

(2019) Ikenna O. Okekeogbu et al.   PLANT CELL

Sugar release and growth of biofuel crops are improved by downregulation of pectin biosynthesis

(2018) Ajaya K Biswal et al.   NATURE BIOTECHNOLOGY

Cellulose Synthase Stoichiometry in Aspen Differs from Arabidopsis and Norway Spruce

(2018) Xueyang Zhang et al.   PLANT PHYSIOLOGY

PlantPAN3.0: a new and updated resource for reconstructing transcriptional regulatory networks from ChIP-seq experiments in plants

(2018) Chi-Nga Chow et al.   NUCLEIC ACIDS RESEARCH

The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization

(2017) Ryan F. McCormick et al.   PLANT JOURNAL

The orientation of transcription factor binding site motifs in gene promoter regions: does it matter?

(2016) Monika Lis et al.   BMC GENOMICS

A DUF-246 family glycosyltransferase-like gene affects male fertility and the biosynthesis of pectic arabinogalactans

(2016) Solomon Stonebloom et al.   BMC PLANT BIOLOGY

Dynamics of biomass partitioning, stem gene expression, cell wall biosynthesis, and sucrose accumulation during development ofSorghum bicolor

(2016) Brian McKinley et al.   PLANT JOURNAL

Two Trichome Birefringence-Like Proteins Mediate Xylan Acetylation, Which Is Essential for Leaf Blight Resistance in Rice

(2016) Yaping Gao et al.   PLANT PHYSIOLOGY

Nonsyntenic genes drive tissue-specific dynamics of differential, nonadditive and allelic expression patterns in maize hybrids

(2016) Jutta Baldauf et al.   PLANT PHYSIOLOGY

Structure, organization and evolution of ADP-ribosylation factors in rice and foxtail millet and their expression in rice

(2016) Mehanathan Muthamilarasan et al.   Scientific Reports

Enhancing cellulose utilization for fuels and chemicals by genetic modification of plant cell wall architecture

(2015) Wilfred Vermerris et al.   CURRENT OPINION IN BIOTECHNOLOGY

Identification and characterization of presence/absence variation in maize genotype Mo17

(2015) Lu Jiang et al.   Genes & Genomics

Biomass recalcitrance: a multi-scale, multi-factor, and conversion-specific property: Fig. 1.

(2015) Maureen C. McCann et al.   JOURNAL OF EXPERIMENTAL BOTANY

Comparative interrogation of the developing xylem transcriptomes of two wood-forming species:Populus trichocarpaandEucalyptus grandis

(2015) Charles A. Hefer et al.   NEW PHYTOLOGIST

High-resolution genetic mapping of maize pan-genome sequence anchors

(2015) Fei Lu et al.   Nature Communications

Functional characterization of drought-responsive modules and genes in Oryza sativa: a network-based approach

(2015) Sanchari Sircar et al.   Frontiers in Genetics

Validation of PyMBMS as a High-throughput Screen for Lignin Abundance in Lignocellulosic Biomass of Grasses

(2014) Bryan W. Penning et al.   BioEnergy Research

The Genetic Architecture Of Maize Height

(2014) Jason A. Peiffer et al.   GENETICS

TheArabidopsisCellulose Synthase Complex: A Proposed Hexamer of CESA Trimers in an Equimolar Stoichiometry

(2014) Joseph L. Hill et al.   PLANT CELL

Nonsyntenic Genes Drive Highly Dynamic Complementation of Gene Expression in Maize Hybrids

(2014) A. Paschold et al.   PLANT CELL

Catalytic Subunit Stoichiometry within the Cellulose Synthase Complex

(2014) M. Gonneau et al.   PLANT PHYSIOLOGY

Genetic Determinants for Enzymatic Digestion of Lignocellulosic Biomass Are Independent of Those for Lignin Abundance in a Maize Recombinant Inbred Population

(2014) B. W. Penning et al.   PLANT PHYSIOLOGY

Promzea: a pipeline for discovery of co-regulatory motifs in maize and other plant species and its application to the anthocyanin and phlobaphene biosynthetic pathways and the Maize Development Atlas

(2013) Christophe Liseron-Monfils et al.   BMC PLANT BIOLOGY

Grass cell wall feruloylation: distribution of bound ferulate and candidate gene expression in Brachypodium distachyon

(2013) Hugo B. C. Molinari et al.   Frontiers in Plant Science

Endo-(1,4)-β-Glucanase gene families in the grasses: temporal and spatial Co-transcription of orthologous genes1

(2012) Margaret Buchanan et al.   BMC PLANT BIOLOGY

Complementation contributes to transcriptome complexity in maize (Zea mays L.) hybrids relative to their inbred parents

(2012) A. Paschold et al.   GENOME RESEARCH

Identification of an additional protein involved in mannan biosynthesis

(2012) Yan Wang et al.   PLANT JOURNAL

Characterizing Regulatory and Functional Differentiation between Maize Mesophyll and Bundle Sheath Cells by Transcriptomic Analysis

(2012) Y.-M. Chang et al.   PLANT PHYSIOLOGY

Identification of Gene Modules Associated with Drought Response in Rice by Network-Based Analysis

(2012) Lida Zhang et al.   PLoS One

XAX1 from glycosyltransferase family 61 mediates xylosyltransfer to rice xylan

(2012) D. Chiniquy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Glycosyl transferases in family 61 mediate arabinofuranosyl transfer onto xylan in grasses

(2012) N. Anders et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

O-Acetylation of Plant Cell Wall Polysaccharides

(2012) Sascha Gille et al.   Frontiers in Plant Science

Genome-wide association study of leaf architecture in the maize nested association mapping population

(2011) Feng Tian et al.   NATURE GENETICS

Genome-wide atlas of transcription during maize development

(2011) Rajandeep S. Sekhon et al.   PLANT JOURNAL

Arabidopsis Deficient in Cutin Ferulate Encodes a Transferase Required for Feruloylation of  -Hydroxy Fatty Acids in Cutin Polyester

(2011) C. Rautengarten et al.   PLANT PHYSIOLOGY

Modifying crops to increase cell wall digestibility

(2011) Hans-Joachim G. Jung et al.   PLANT SCIENCE

Transcriptional networks for lignin biosynthesis: more complex than we thought?

(2011) Qiao Zhao et al.   TRENDS IN PLANT SCIENCE

Genome-wide transcriptome analysis of the transition from primary to secondary stem development in Populus trichocarpa

(2010) Palitha Dharmawardhana et al.   BMC GENOMICS

Regulation of plant biomass production

(2010) Taku Demura et al.   CURRENT OPINION IN PLANT BIOLOGY

Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor

(2010) R. A. Swanson-Wagner et al.   GENOME RESEARCH

The developmental dynamics of the maize leaf transcriptome

(2010) Pinghua Li et al.   NATURE GENETICS

Evolutionary conservation of the transcriptional network regulating secondary cell wall biosynthesis

(2010) Ruiqin Zhong et al.   TRENDS IN PLANT SCIENCE

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Genetic Resources for Maize Cell Wall Biology

(2009) B. W. Penning et al.   PLANT PHYSIOLOGY

The Genetic Architecture of Maize Flowering Time

(2009) E. S. Buckler et al.   SCIENCE

Maize Inbreds Exhibit High Levels of Copy Number Variation (CNV) and Presence/Absence Variation (PAV) in Genome Content

(2009) Nathan M. Springer et al.   PLoS Genetics

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Cellulose biosynthesis and deposition in higher plants

(2008) Neil G. Taylor   NEW PHYTOLOGIST

Improvement of biomass through lignin modification

(2008) Xu Li et al.   PLANT JOURNAL

Characterization of IRX10 and IRX10-like reveals an essential role in glucuronoxylan biosynthesis in Arabidopsis

(2008) David M. Brown et al.   PLANT JOURNAL

The Arabidopsis IRX10 and IRX10-LIKE glycosyltransferases are critical for glucuronoxylan biosynthesis during secondary cell wall formation

(2008) Ai-Min Wu et al.   PLANT JOURNAL