Assembly-based inference of B-cell receptor repertoires from short read RNA sequencing data with V’DJer
出版年份 2016 全文链接
标题
Assembly-based inference of B-cell receptor repertoires from short read RNA sequencing data with V’DJer
作者
关键词
-
出版物
BIOINFORMATICS
Volume 32, Issue 24, Pages 3729-3734
出版商
Oxford University Press (OUP)
发表日期
2016-08-25
DOI
10.1093/bioinformatics/btw526
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- iWAS – A novel approach to analyzing Next Generation Sequence data for immunology
- (2016) Benjamin Vincent et al. CELLULAR IMMUNOLOGY
- CRISPR Detection From Short Reads Using Partial Overlap Graphs
- (2016) Ilan Ben-Bassat et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Genomic Classification of Cutaneous Melanoma
- (2015) Rehan Akbani et al. CELL
- The prognostic landscape of genes and infiltrating immune cells across human cancers
- (2015) Andrew J Gentles et al. NATURE MEDICINE
- Immunoglobulin transcript sequence and somatic hypermutation computation from unselected RNA-seq reads in chronic lymphocytic leukemia
- (2015) James S. Blachly et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- High-throughput pairing of T cell receptor α and β sequences
- (2015) Bryan Howie et al. Science Translational Medicine
- Peptide/MHC Tetramer-Based Sorting of CD8+ T Cells to a Leukemia Antigen Yields Clonotypes Drawn Nonspecifically from an Underlying Restricted Repertoire
- (2015) S. A. Hunsucker et al. Cancer Immunology Research
- ABRA: improved coding indel detection via assembly-based realignment
- (2014) Lisle E. Mose et al. BIOINFORMATICS
- Immunoglobulin and T Cell Receptor Gene High-Throughput Sequencing Quantifies Minimal Residual Disease in Acute Lymphoblastic Leukemia and Predicts Post-Transplantation Relapse and Survival
- (2014) Aaron C. Logan et al. BIOLOGY OF BLOOD AND MARROW TRANSPLANTATION
- Prognostic B-cell Signatures Using mRNA-Seq in Patients with Subtype-Specific Breast and Ovarian Cancer
- (2014) M. D. Iglesia et al. CLINICAL CANCER RESEARCH
- In-depth determination and analysis of the human paired heavy- and light-chain antibody repertoire
- (2014) Brandon J DeKosky et al. NATURE MEDICINE
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Shaping of Human Germline IgH Repertoires Revealed by Deep Sequencing
- (2012) K. Larimore et al. JOURNAL OF IMMUNOLOGY
- RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
- (2011) Bo Li et al. BMC BIOINFORMATICS
- Exhaustive T-cell repertoire sequencing of human peripheral blood samples reveals signatures of antigen selection and a directly measured repertoire size of at least 1 million clonotypes
- (2011) R. L. Warren et al. GENOME RESEARCH
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Profiling model T-cell metagenomes with short reads
- (2009) René L. Warren et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Cloning and expression of murine Ig genes from single B cells
- (2009) Thomas Tiller et al. JOURNAL OF IMMUNOLOGICAL METHODS
- Measurement and Clinical Monitoring of Human Lymphocyte Clonality by Massively Parallel V-D-J Pyrosequencing
- (2009) S. D. Boyd et al. Science Translational Medicine
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search