标题
Genome assembly from synthetic long read clouds
作者
关键词
-
出版物
BIOINFORMATICS
Volume 32, Issue 12, Pages i216-i224
出版商
Oxford University Press (OUP)
发表日期
2016-06-15
DOI
10.1093/bioinformatics/btw267
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Read clouds uncover variation in complex regions of the human genome
- (2015) Alex Bishara et al. GENOME RESEARCH
- Accurate, multi-kb reads resolve complex populations and detect rare microorganisms
- (2015) Itai Sharon et al. GENOME RESEARCH
- Assembling large genomes with single-molecule sequencing and locality-sensitive hashing
- (2015) Konstantin Berlin et al. NATURE BIOTECHNOLOGY
- Synthetic long-read sequencing reveals intraspecies diversity in the human microbiome
- (2015) Volodymyr Kuleshov et al. NATURE BIOTECHNOLOGY
- Illumina Synthetic Long Read Sequencing Allows Recovery of Missing Sequences even in the “Finished” C. elegans Genome
- (2015) Runsheng Li et al. Scientific Reports
- Probabilistic single-individual haplotyping
- (2014) V. Kuleshov BIOINFORMATICS
- In vitro, long-range sequence information for de novo genome assembly via transposase contiguity
- (2014) Andrew Adey et al. GENOME RESEARCH
- Resolving the complexity of the human genome using single-molecule sequencing
- (2014) Mark J. P. Chaisson et al. NATURE
- Whole-genome haplotyping using long reads and statistical methods
- (2014) Volodymyr Kuleshov et al. NATURE BIOTECHNOLOGY
- Haplotype-resolved whole-genome sequencing by contiguity-preserving transposition and combinatorial indexing
- (2014) Sasan Amini et al. NATURE GENETICS
- Illumina TruSeq Synthetic Long-Reads Empower De Novo Assembly and Resolve Complex, Highly-Repetitive Transposable Elements
- (2014) Rajiv C. McCoy et al. PLoS One
- Species-Level Deconvolution of Metagenome Assemblies with Hi-C–Based Contact Probability Maps
- (2014) Joshua N. Burton et al. G3-Genes Genomes Genetics
- Dynamic regulation of genome-wide pre-mRNA splicing and stress tolerance by the Sm-like protein LSm5 in Arabidopsis
- (2014) Peng Cui et al. GENOME BIOLOGY
- QUAST: quality assessment tool for genome assemblies
- (2013) Alexey Gurevich et al. BIOINFORMATICS
- Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions
- (2013) Joshua N Burton et al. NATURE BIOTECHNOLOGY
- Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
- (2013) Chen-Shan Chin et al. NATURE METHODS
- The genome sequence of the colonial chordate, Botryllus schlosseri
- (2013) Ayelet Voskoboynik et al. eLife
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Accurate whole-genome sequencing and haplotyping from 10 to 20 human cells
- (2012) Brock A. Peters et al. NATURE
- A framework for human microbiome research
- (2012) NATURE
- Hybrid error correction and de novo assembly of single-molecule sequencing reads
- (2012) Sergey Koren et al. NATURE BIOTECHNOLOGY
- Large and linked in scientific publishing
- (2012) Laurie Goodman et al. GigaScience
- GAGE: A critical evaluation of genome assemblies and assembly algorithms
- (2011) S. L. Salzberg et al. GENOME RESEARCH
- Fosmid-based whole genome haplotyping of a HapMap trio child: evaluation of Single Individual Haplotyping techniques
- (2011) Jorge Duitama et al. NUCLEIC ACIDS RESEARCH
- Scaffolding pre-assembled contigs using SSPACE
- (2010) Marten Boetzer et al. BIOINFORMATICS
- Pebble and Rock Band: Heuristic Resolution of Repeats and Scaffolding in the Velvet Short-Read de Novo Assembler
- (2009) Daniel R. Zerbino et al. PLoS One
- De novo fragment assembly with short mate-paired reads: Does the read length matter?
- (2008) M. J. Chaisson et al. GENOME RESEARCH
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now