De novo transcriptomes of 14 gammarid individuals for proteogenomic analysis of seven taxonomic groups
出版年份 2019 全文链接
标题
De novo transcriptomes of 14 gammarid individuals for proteogenomic analysis of seven taxonomic groups
作者
关键词
-
出版物
Scientific Data
Volume 6, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2019-09-27
DOI
10.1038/s41597-019-0192-5
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Identification of Candidate Genes for the Plateau Adaptation of a Tibetan Amphipod, Gammarus lacustris, Through Integration of Genome and Transcriptome Sequencing
- (2019) Shubo Jin et al. Frontiers in Genetics
- Combination of In Situ Feeding Rate Experiments and Chemical Body Burden Analysis to Assess the Influence of Micropollutants in Wastewater on Gammarus pulex
- (2019) Sarah Könemann et al. International Journal of Environmental Research and Public Health
- Species-specific behaviours in amphipods highlight the need for understanding baseline behaviours in ecotoxicology
- (2018) Shanelle A. Kohler et al. AQUATIC TOXICOLOGY
- The Toxicogenome of Hyalella azteca: A Model for Sediment Ecotoxicology and Evolutionary Toxicology
- (2018) Helen C. Poynton et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- High stoichiometric food quality increases moulting organism vulnerability to pollutant impacts: An experimental test with Gammarus fossarum (Crustacea: Amphipoda)
- (2018) Julio Arce-Funck et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Effects of the herbicide Roundup® on the metabolic activity of Gammarus fossarum Koch, 1836 (Crustacea; Amphipoda)
- (2018) Stefanie von Fumetti et al. ECOTOXICOLOGY
- Internal Concentrations in Gammarids Reveal Increased Risk of Organic Micropollutants in Wastewater-Impacted Streams
- (2018) Nicole A. Munz et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Ecotoxicoproteomics: A decade of progress in our understanding of anthropogenic impact on the environment
- (2018) Duarte Gouveia et al. Journal of Proteomics
- Wastewater alters feeding rate but not vitellogenin level of Gammarus fossarum (Amphipoda)
- (2018) Barbara Ganser et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Ecotoxico-Proteomics for Aquatic Environmental Monitoring: First in Situ Application of a New Proteomics-Based Multibiomarker Assay Using Caged Amphipods
- (2017) Duarte Gouveia et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Caged Gammarus as biomonitors identifying thresholds of toxic metal bioavailability that affect gammarid densities at the French national scale
- (2017) Alexandre Ciliberti et al. WATER RESEARCH
- The transcriptomes of cave and surface populations of Gammarus minus (Crustacea: Amphipoda) provide evidence for positive selection on cave downregulated transcripts
- (2017) David B. Carlini et al. PLoS One
- TransRate: reference-free quality assessment of de novo transcriptome assemblies
- (2016) Richard Smith-Unna et al. GENOME RESEARCH
- High-throughput proteome dynamics for discovery of key proteins in sentinel species: Unsuspected vitellogenins diversity in the crustacean Gammarus fossarum
- (2016) Judith Trapp et al. Journal of Proteomics
- Proteogenomic insights into the core-proteome of female reproductive tissues from crustacean amphipods
- (2016) Judith Trapp et al. Journal of Proteomics
- Embryonic transcriptome of the brackishwater amphipod Gammarus chevreuxi
- (2016) Manuela Truebano et al. Marine Genomics
- The genome of the crustacean Parhyale hawaiensis, a model for animal development, regeneration, immunity and lignocellulose digestion
- (2016) Damian Kao et al. eLife
- Crustacean Intersexuality Is Feminization without Demasculinization: Implications for Environmental Toxicology
- (2014) Stephen Short et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Next-Generation Proteomics: Toward Customized Biomarkers for Environmental Biomonitoring
- (2014) Judith Trapp et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Confrontation of cryptic diversity and mate discrimination withinGammarus pulexandGammarus fossarumspecies complexes
- (2014) Clement Lagrue et al. FRESHWATER BIOLOGY
- Proteomic Investigation of Male Gammarus fossarum, a Freshwater Crustacean, in Response to Endocrine Disruptors
- (2014) Judith Trapp et al. JOURNAL OF PROTEOME RESEARCH
- Non-model organisms, a species endangered by proteogenomics
- (2014) Jean Armengaud et al. Journal of Proteomics
- Proteogenomics ofGammarus fossarumto Document the Reproductive System of Amphipods
- (2014) Judith Trapp et al. MOLECULAR & CELLULAR PROTEOMICS
- afterParty: turning raw transcriptomes into permanent resources
- (2013) Martin Jones et al. BMC BIOINFORMATICS
- Molecular evidence for further overlooked species within the Gammarus fossarum complex (Crustacea: Amphipoda)
- (2013) Martina Weiss et al. HYDROBIOLOGIA
- The Maternal Transcriptome of the Crustacean Parhyale hawaiensis Is Inherited Asymmetrically to Invariant Cell Lineages of the Ectoderm and Mesoderm
- (2013) Peter Nestorov et al. PLoS One
- Vitellogenin-like proteins in the freshwater amphipod Gammarus fossarum (Koch, 1835): Functional characterization throughout reproductive process, potential for use as an indicator of oocyte quality and endocrine disruption biomarker in males
- (2012) Guillaume Jubeaux et al. AQUATIC TOXICOLOGY
- High Through-Put Sequencing of the Parhyale hawaiensis mRNAs and microRNAs to Aid Comparative Developmental Studies
- (2012) Martin J. Blythe et al. PLoS One
- Caged Gammarus fossarum (Crustacea) as a robust tool for the characterization of bioavailable contamination levels in continental waters: Towards the determination of threshold values
- (2012) Jean-Philippe Besse et al. WATER RESEARCH
- De novo assembly and characterization of a maternal and developmental transcriptome for the emerging model crustacean Parhyale hawaiensis
- (2011) Victor Zeng et al. BMC GENOMICS
- DNA damage in caged Gammarus fossarum amphipods: A tool for freshwater genotoxicity assessment
- (2011) Emilie Lacaze et al. ENVIRONMENTAL POLLUTION
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Spatial Distribution of Cryptic Species Diversity in European Freshwater Amphipods (Gammarus fossarum) as Revealed by Pyrosequencing
- (2011) Anja Marie Westram et al. PLoS One
- In situ feeding assay with Gammarus fossarum (Crustacea): Modelling the influence of confounding factors to improve water quality biomonitoring
- (2011) Romain Coulaud et al. WATER RESEARCH
- Ovarian cycle and embryonic development in Gammarus fossarum: Application for reproductive toxicity assessment
- (2010) Olivier Geffard et al. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY
- Mass spectrometry assay as an alternative to the enzyme-linked immunosorbent assay test for biomarker quantitation in ecotoxicology: Application to vitellogenin in Crustacea (Gammarus fossarum)
- (2010) Romain Simon et al. JOURNAL OF CHROMATOGRAPHY A
- Additive vs non-additive genetic components in lethal cadmium tolerance of Gammarus (Crustacea): Novel light on the assessment of the potential for adaptation to contamination
- (2009) Arnaud Chaumot et al. AQUATIC TOXICOLOGY
- Acetylcholinesterase activity in Gammarus fossarum (Crustacea Amphipoda)
- (2009) Benoît Xuereb et al. AQUATIC TOXICOLOGY
- SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building
- (2009) M. Gouy et al. MOLECULAR BIOLOGY AND EVOLUTION
- Physiological and behavioural responses of Gammarus pulex (Crustacea: Amphipoda) exposed to cadmium
- (2007) V. Felten et al. AQUATIC TOXICOLOGY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now