Ten simple rules to create biological network figures for communication

NUP155 insufficiency recalibrates a pluripotent transcriptome with network remodeling of a cardiogenic signaling module

(2018) Claudia C. Preston et al.   BMC Systems Biology

The Perception of Graph Properties in Graph Layouts

(2018) Utkarsh Soni et al.   COMPUTER GRAPHICS FORUM

Details-First, Show Context, Overview Last: Supporting Exploration of Viscous Fingers in Large-Scale Ensemble Simulations

(2018)   IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS

Matrix Reordering Methods for Table and Network Visualization

(2016) Michael Behrisch et al.   COMPUTER GRAPHICS FORUM

MOSBIE: a tool for comparison and analysis of rule-based biochemical models

(2014) John E et al.   BMC BIOINFORMATICS

A mesoscale connectome of the mouse brain

(2014) Seung Wook Oh et al.   NATURE

Ten Simple Rules for Better Figures

(2014) Nicolas P. Rougier et al.   PLoS Computational Biology

Computational Tools for the Interactive Exploration of Proteomic and Structural Data

(2010) John H. Morris et al.   MOLECULAR & CELLULAR PROTEOMICS

Visualization of omics data for systems biology

(2010) Nils Gehlenborg et al.   NATURE METHODS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

“Search, Show Context, Expand on Demand”: Supporting Large Graph Exploration with Degree-of-Interest

(2009) F. van Ham et al.   IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS

Proteome Organization in a Genome-Reduced Bacterium

(2009) S. Kuhner et al.   SCIENCE