Using crop growth model stress covariates and AMMI decomposition to better predict genotype-by-environment interactions

Using environmental clustering to identify specific drought tolerance QTLs in bread wheat (T. aestivum L.)

(2019) Gaëtan Touzy et al.   THEORETICAL AND APPLIED GENETICS

Whole-genome prediction of reaction norms to environmental stress in bread wheat ( Triticum aestivum L.) by genomic random regression

(2018) Delphine Ly et al.   FIELD CROPS RESEARCH

High throughput SNP discovery and genotyping in hexaploid wheat

(2018) Hélène Rimbert et al.   PLoS One

Correcting for spatial heterogeneity in plant breeding experiments with P-splines

(2018) María Xosé Rodríguez-Álvarez et al.   Spatial Statistics

Climate change impact and adaptation for wheat protein

(2018) Senthold Asseng et al.   GLOBAL CHANGE BIOLOGY

Maize yields over Europe may increase in spite of climate change, with an appropriate use of the genetic variability of flowering time

(2018) Boris Parent et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phenomic Selection Is a Low-Cost and High-Throughput Method Based on Indirect Predictions: Proof of Concept on Wheat and Poplar

(2018) Renaud Rincent et al.   G3-Genes Genomes Genetics

Nitrogen nutrition index predicted by a crop model improves the genomic prediction of grain number for a bread wheat core collection

(2017) Delphine Ly et al.   FIELD CROPS RESEARCH

A Model of Leaf Coordination to Scale-Up Leaf Expansion from the Organ to the Canopy

(2017) Pierre Martre et al.   PLANT PHYSIOLOGY

Optimization of multi-environment trials for genomic selection based on crop models

(2017) R. Rincent et al.   THEORETICAL AND APPLIED GENETICS

Extending the Marker × Environment Interaction Model for Genomic-Enabled Prediction and Genome-Wide Association Analysis in Durum Wheat

(2016) José Crossa et al.   CROP SCIENCE

Predicting Responses in Multiple Environments: Issues in Relation to Genotype × Environment Interactions

(2016) Marcos Malosetti et al.   CROP SCIENCE

Increased Prediction Accuracy in Wheat Breeding Trials Using a Marker × Environment Interaction Genomic Selection Model

(2015) Marco Lopez-Cruz et al.   G3-Genes Genomes Genetics

A Weighted AMMI Algorithm to Study Genotype-by-Environment Interaction and QTL-by-Environment Interaction

(2014) Paulo C. Rodrigues et al.   CROP SCIENCE

Genomic selection allowing for marker-by-environment interaction

(2013) Torben Schulz-Streeck et al.   PLANT BREEDING

A reaction norm model for genomic selection using high-dimensional genomic and environmental data

(2013) Diego Jarquín et al.   THEORETICAL AND APPLIED GENETICS

Integrating environmental covariates and crop modeling into the genomic selection framework to predict genotype by environment interactions

(2013) Nicolas Heslot et al.   THEORETICAL AND APPLIED GENETICS

Genomic Prediction of Breeding Values when Modeling Genotype × Environment Interaction using Pedigree and Dense Molecular Markers

(2012) Juan Burgueño et al.   CROP SCIENCE

Simulation of environmental and genotypic variations of final leaf number and anthesis date for wheat

(2011) Jianqiang He et al.   EUROPEAN JOURNAL OF AGRONOMY

Environment characterization as an aid to wheat improvement: interpreting genotype–environment interactions by modelling water-deficit patterns in North-Eastern Australia

(2011) K. Chenu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Any trait or trait-related allele can confer drought tolerance: just design the right drought scenario

(2011) F. Tardieu   JOURNAL OF EXPERIMENTAL BOTANY

Why are wheat yields stagnating in Europe? A comprehensive data analysis for France

(2010) Nadine Brisson et al.   FIELD CROPS RESEARCH

LASSO with cross-validation for genomic selection

(2010) M. GRAZIANO USAI et al.   Genetics Research

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE