Solid-Phase Chemical Synthesis of Stable Isotope-Labeled RNA to Aid Structure and Dynamics Studies by NMR Spectroscopy

Benefits of stable isotope labeling in RNA analysis

(2019) Paria Asadi-Atoi et al.   BIOLOGICAL CHEMISTRY

The roles of structural dynamics in the cellular functions of RNAs

(2019) Laura R. Ganser et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Heavy-atom labeling of RNA by PLOR for de novo crystallographic phasing

(2019) Jason R. Stagno et al.   PLoS One

Chemo-enzymatic synthesis of position-specifically modified RNA for biophysical studies including light control and NMR spectroscopy

(2018) Harald Schwalbe et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview

(2018) Jiří Šponer et al.   CHEMICAL REVIEWS

CCR 5 RNA Pseudoknots: Residue and Site-Specific Labeling correlate Internal Motions with microRNA Binding

(2018) Bin Chen et al.   CHEMISTRY-A EUROPEAN JOURNAL

Studying sparsely populated conformational states in RNA combining chemical synthesis and solution NMR spectroscopy

(2018) Elisabeth Strebitzer et al.   METHODS

NMR resonance assignments for the SAM/SAH-binding riboswitch RNA bound to S-adenosylhomocysteine

(2018) A. Katharina Weickhmann et al.   Biomolecular NMR Assignments

The structure of the SAM/SAH-binding riboswitch

(2018) A Katharina Weickhmann et al.   NUCLEIC ACIDS RESEARCH

Combining asymmetric 13C-labeling and isotopic filter/edit NOESY: a novel strategy for rapid and logical RNA resonance assignment

(2017) Regan M. LeBlanc et al.   NUCLEIC ACIDS RESEARCH

The lost language of the RNA World

(2017) James W. Nelson et al.   Science Signaling

Insights into RNA structure and dynamics from recent NMR and X-ray studies of the Neurospora Varkud satellite ribozyme

(2017) Pierre Dagenais et al.   Wiley Interdisciplinary Reviews-RNA

The lost language of the RNA World

(2017) James W. Nelson et al.   Science Signaling

Excited States of Nucleic Acids Probed by Proton Relaxation Dispersion NMR Spectroscopy

(2016) Michael Andreas Juen et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

A Stably Protonated Adenine Nucleotide with a Highly Shifted pK a Value Stabilizes the Tertiary Structure of a GTP-Binding RNA Aptamer

(2016) Antje C. Wolter et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Chemo-enzymatic labeling for rapid assignment of RNA molecules

(2016) Andrew P. Longhini et al.   METHODS

Applications of PLOR in labeling large RNAs at specific sites

(2016) Yu Liu et al.   METHODS

The synthesis of 15N(7)-Hoogsteen face-labeled adenosine phosphoramidite for solid-phase RNA synthesis

(2016) Sandro Neuner et al.   MONATSHEFTE FUR CHEMIE

Transcriptional start site heterogeneity modulates the structure and function of the HIV-1 genome

(2016) Siarhei Kharytonchyk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The “Speedy” Synthesis of Atom-Specific15N Imino/Amido-Labeled RNA

(2015) Sandro Neuner et al.   CHEMISTRY-A EUROPEAN JOURNAL

RNA Viruses: RNA Roles in Pathogenesis, Coreplication and Viral Load

(2015) Palmiro Poltronieri et al.   CURRENT GENOMICS

Synthesis and applications of RNAs with position-selective labelling and mosaic composition

(2015) Yu Liu et al.   NATURE

Chemo-enzymatic synthesis of site-specific isotopically labeled nucleotides for use in NMR resonance assignment, dynamics and structural characterizations

(2015) Andrew P. Longhini et al.   NUCLEIC ACIDS RESEARCH

RNA catalysis—is that it?

(2015) Timothy J. Wilson et al.   RNA

The Noncoding RNA Revolution—Trashing Old Rules to Forge New Ones

(2014) Thomas R. Cech et al.   CELL

Regio-Selective Chemical-Enzymatic Synthesis of Pyrimidine Nucleotides Facilitates RNA Structure and Dynamics Studies

(2014) Luigi J. Alvarado et al.   CHEMBIOCHEM

The role of nucleobase interactions in RNA structure and dynamics

(2014) Sandro Bottaro et al.   NUCLEIC ACIDS RESEARCH

Efficient Detection of Hydrogen Bonds in Dynamic Regions of RNA by Sensitivity-Optimized NMR Pulse Sequences

(2013) Andre Dallmann et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Affinity purification of T7 RNA transcripts with homogeneous ends using ARiBo and CRISPR tags

(2013) A. Salvail-Lacoste et al.   RNA

Synthesis of (6-13C)Pyrimidine Nucleotides as Spin-Labels for RNA Dynamics

(2012) Christoph H. Wunderlich et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Mapping the Landscape of RNA Dynamics with NMR Spectroscopy

(2011) Jörg Rinnenthal et al.   ACCOUNTS OF CHEMICAL RESEARCH

Synthesis and biological activity of artificial mRNA prepared with novel phosphorylating reagents

(2010) Seigo Nagata et al.   NUCLEIC ACIDS RESEARCH

A fast, efficient and sequence-independent method for flexible multiple segmental isotope labeling of RNA using ribozyme and RNase H cleavage

(2010) Olivier Duss et al.   NUCLEIC ACIDS RESEARCH

Structure determination and dynamics of protein–RNA complexes by NMR spectroscopy

(2010) Cyril Dominguez et al.   PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY

The Unstable Part of the Apical Stem of Duck Hepatitis B Virus Epsilon Shows Enhanced Base Pair Opening but Not Pico- to Nanosecond Dynamics and Is Essential for Reverse Transcriptase Binding

(2009) Kirsten A. M. Ampt et al.   BIOCHEMISTRY

Optimized synthesis of [3-15N]-labeled uridine phosphoramidites

(2009) Bharat Baral et al.   TETRAHEDRON LETTERS

Small RNA Regulators of Gene Expression

(2008) Joel R. Neilson et al.   CELL

Protecting groups for RNA synthesis: an increasing need for selective preparative methods

(2008) Álvaro Somoza   CHEMICAL SOCIETY REVIEWS

Key Labeling Technologies to Tackle Sizeable Problems in RNA Structural Biology

(2008) Kwaku Dayie   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Multiple segmental and selective isotope labeling of large RNA for NMR structural studies

(2008) F. H. T. Nelissen et al.   NUCLEIC ACIDS RESEARCH

An electrospray mass spectrometric method for accurate mass determination of highly acid-sensitive phosphoramidites

(2008) Zoltán Kupihár et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY