Novel Genes Associated with the Development of Carotid Paragangliomas

HK3 overexpression associated with epithelial-mesenchymal transition in colorectal cancer

(2018) Elena A. Pudova et al.   BMC GENOMICS

Exome analysis of carotid body tumor

(2018) Anastasiya V. Snezhkina et al.   BMC Medical Genomics

Characterization of germline mutations in familial lung cancer from the Chinese population

(2018) Madiha Kanwal et al.   GENE

The TMEM127 human tumor suppressor is a component of the mTORC1 lysosomal nutrient-sensing complex

(2018) Yilun Deng et al.   HUMAN MOLECULAR GENETICS

Menin regulates the serine biosynthetic pathway in Ewing sarcoma

(2018) Laurie K Svoboda et al.   JOURNAL OF PATHOLOGY

Overexpression of microRNAs miR-9, -98, and -199 Correlates with the Downregulation of HK2 Expression in Colorectal Cancer

(2018) A. V. Snezhkina et al.   MOLECULAR BIOLOGY

Suppression of NR0B2 gene in Clear Cell Renal Cell Carcinoma Is Associated with Hypermethylation of Its Promoter

(2018) A. V. Kudryavtseva et al.   MOLECULAR BIOLOGY

Familial Esophageal Squamous Cell Carcinoma with damaging rare/germline mutations in KCNJ12/KCNJ18 and GPRIN2 genes

(2018) Narjes Khalilipour et al.   Cancer Genetics

HPV-transformed cells exhibit altered HMGB1-TLR4/MyD88-SARM1 signaling axis

(2018) Mirian Galliote Morale et al.   Scientific Reports

Diagnosis and surgical treatment of carotid body tumor: A retrospective analysis of 58 patients

(2017) Qingquan Hua et al.   Oncology Letters

Molecular markers of paragangliomas/pheochromocytomas

(2017) Svetlana O. Zhikrivetskaya et al.   Oncotarget

DISC1 Modulates Neuronal Stress Responses by Gate-Keeping ER-Mitochondria Ca 2+ Transfer through the MAM

(2017) Sung Jin Park et al.   Cell Reports

Overall survival in EGFR mutated non-small-cell lung cancer patients treated with afatinib after EGFR TKI and resistant mechanisms upon disease progression

(2017) A. J. van der Wekken et al.   PLoS One

Effect of lentivirus-mediated shRNA inactivation of HK1, HK2, and HK3 genes in colorectal cancer and melanoma cells

(2016) Anna V. Kudryavtseva et al.   BMC GENETICS

Differential expression of alternatively spliced transcripts related to energy metabolism in colorectal cancer

(2016) Anastasiya Vladimirovna Snezhkina et al.   BMC GENOMICS

A double-negative feedback loop between EZH2 and miR-26a regulates tumor cell growth in hepatocellular carcinoma

(2016) CHUNBO ZHUANG et al.   INTERNATIONAL JOURNAL OF ONCOLOGY

Expression of serine/glycine metabolism-related proteins is different according to the thyroid cancer subtype

(2016) Woo Young Sun et al.   Journal of Translational Medicine

Axon Self-Destruction: New Links among SARM1, MAPKs, and NAD+ Metabolism

(2016) Josiah Gerdts et al.   NEURON

The Dysregulation of Polyamine Metabolism in Colorectal Cancer Is Associated with Overexpression of c-Myc and C/EBPβrather than EnterotoxigenicBacteroides fragilisInfection

(2016) Anastasiya V. Snezhkina et al.   Oxidative Medicine and Cellular Longevity

MUC1, MUC2, MUC5AC, and MUC6 in colorectal cancer: expression profiles and clinical significance

(2016) Johannes Betge et al.   VIRCHOWS ARCHIV

ANP32B deficiency impairs proliferation and suppresses tumor progression by regulating AKT phosphorylation

(2016) S Yang et al.   Cell Death & Disease

Identification of differentially expressed serum proteins in gastric adenocarcinoma

(2015) Yashwanth Subbannayya et al.   Journal of Proteomics

SIFT missense predictions for genomes

(2015) Robert Vaser et al.   Nature Protocols

IGF-binding protein 2 is a candidate target of therapeutic potential in cancer

(2015) Xiaofeng Yao et al.   TUMOR BIOLOGY

Diagnostic marker signature for esophageal cancer from transcriptome analysis

(2015) Ute Warnecke-Eberz et al.   TUMOR BIOLOGY

Genome-wide mutational spectra analysis reveals significant cancer-specific heterogeneity

(2015) Hua Tan et al.   Scientific Reports

Polymorphisms in mucin genes in the development of gastric cancer

(2015) Rong Wen   World Journal of Gastrointestinal Oncology

Blood-Based Protein Biomarker Panel for the Detection of Colorectal Cancer

(2015) Kim Y. C. Fung et al.   PLoS One

Proteomics of dedifferentiation of SK-N-BE2 neuroblastoma cells

(2014) Ravi Kanth Rao Saini et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Identification of chimeric TSNAX–DISC1 resulting from intergenic splicing in endometrial carcinoma through high-throughput RNA sequencing

(2014) Na Li et al.   CARCINOGENESIS

Comprehensive characterization of the genomic alterations in human gastric cancer

(2014) Juan Cui et al.   INTERNATIONAL JOURNAL OF CANCER

Rare Germline Mutations Identified by Targeted Next-Generation Sequencing of Susceptibility Genes in Pheochromocytoma and Paraganglioma

(2014) Jenny Welander et al.   JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM

Germ-line PHD1 and PHD2 mutations detected in patients with pheochromocytoma/paraganglioma-polycythemia

(2014) Chunzhang Yang et al.   JOURNAL OF MOLECULAR MEDICINE-JMM

Differential Expression of Enzymes Associated with Serine/Glycine Metabolism in Different Breast Cancer Subtypes

(2014) Sang Kyum Kim et al.   PLoS One

Identification of 2R-ohnologue gene families displaying the same mutation-load skew in multiple cancers

(2014) M. Tinti et al.   Open Biology

Systematic tracking of dysregulated modules identifies novel genes in cancer

(2013) Sriganesh Srihari et al.   BIOINFORMATICS

The silence of MUC2 mRNA induced by promoter hypermethylation associated with HBV in Hepatocellular Carcinoma

(2013) Yang Ling et al.   BMC Medical Genetics

IGF binding protein 2 is a cell-autonomous factor supporting survival and migration of acute leukemia cells

(2013) Xiaoli Chen et al.   Journal of Hematology & Oncology

Mutational heterogeneity in cancer and the search for new cancer-associated genes

(2013) Michael S. Lawrence et al.   NATURE

Expression of aquaporin water channels in human urothelial carcinoma: correlation of AQP3 expression with tumour grade and stage

(2013) Peter C. Rubenwolf et al.   WORLD JOURNAL OF UROLOGY

Serum IGFBP2 and MSLN as diagnostic and prognostic biomarkers for pancreatic cancer

(2013) Zachary W. Kendrick et al.   HPB

Alternative Variants of Human HYDIN Are Novel Cancer-Associated Antigens Recognized by Adaptive Immunity

(2013) K. Laske et al.   Cancer Immunology Research

Recessive HYDIN Mutations Cause Primary Ciliary Dyskinesia without Randomization of Left-Right Body Asymmetry

(2012) Heike Olbrich et al.   AMERICAN JOURNAL OF HUMAN GENETICS

POTE protein, a cancer-testis antigen, is highly expressed in spermatids in human testis and is associated with apoptotic cells

(2012) Tapan K. Bera et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Searching for molecular targets in sarcoma

(2012) Beverly A. Teicher   BIOCHEMICAL PHARMACOLOGY

Hornerin, an S100 family protein, is functional in breast cells and aberrantly expressed in breast cancer

(2012) Jodie M Fleming et al.   BMC CANCER

Evaluation of SDHB, SDHD and VHL gene susceptibility testing in the assessment of individuals with non-syndromic phaeochromocytoma, paraganglioma and head and neck paraganglioma

(2012) Mariam Jafri et al.   CLINICAL ENDOCRINOLOGY

Head and neck paragangliomas: clinical and molecular genetic classification

(2012) C Offergeld et al.   Clinics

Signaling Pathways in Pheochromocytomas and Paragangliomas: Prospects for Future Therapies

(2012) Svenja Nölting et al.   ENDOCRINE PATHOLOGY

Targeting the MAPK–RAS–RAF signaling pathway in cancer therapy

(2012) Libero Santarpia et al.   EXPERT OPINION ON THERAPEUTIC TARGETS

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

MicroRNA-26a/b and their host genes cooperate to inhibit the G1/S transition by activating the pRb protein

(2012) Ying Zhu et al.   NUCLEIC ACIDS RESEARCH

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

(2012) Guangchuang Yu et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

High IGFBP2 Expression Correlates with Tumor Severity in Pediatric Rhabdomyosarcoma

(2011) Lucia Tombolan et al.   AMERICAN JOURNAL OF PATHOLOGY

MUC4 Is a Highly Sensitive and Specific Marker for Low-grade Fibromyxoid Sarcoma

(2011) Leona A. Doyle et al.   AMERICAN JOURNAL OF SURGICAL PATHOLOGY

The MUC4 membrane-bound mucin regulates esophageal cancer cell proliferation and migration properties: Implication for S100A4 protein

(2011) Emilie Bruyère et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

l-3-Phosphoserine phosphatase (PSPH) regulates cutaneous squamous cell carcinoma proliferation independent of l-serine biosynthesis

(2011) Michael A. Bachelor et al.   JOURNAL OF DERMATOLOGICAL SCIENCE

NMDA receptor regulates migration of newly generated neurons in the adult hippocampus via Disrupted-In-Schizophrenia 1 (DISC1)

(2011) Takashi Namba et al.   JOURNAL OF NEUROCHEMISTRY

A multicentre phase II gene expression profiling study of putative relationships between tumour biomarkers and clinical response with erlotinib in non-small-cell lung cancer

(2010) E.-H. Tan et al.   ANNALS OF ONCOLOGY

IGFBP2 promotes glioma tumor stem cell expansion and survival

(2010) David Hsieh et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

P70S6K 1 regulation of angiogenesis through VEGF and HIF-1α expression

(2010) Chuan-Xiu Bian et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

Identification of novel cluster groups in pediatric high-risk B-precursor acute lymphoblastic leukemia with gene expression profiling: correlation with genome-wide DNA copy number alterations, clinical characteristics, and outcome

(2010) R. C. Harvey et al.   BLOOD

Two members of the SIBLING family of proteins, DSPP and BSP, may predict the transition of oral epithelial dysplasia to oral squamous cell carcinoma

(2010) Kalu U. E. Ogbureke et al.   CANCER

Comparison of lung cancer cell lines representing four histopathological subtypes with gene expression profiling using quantitative real-time PCR

(2010) Takashi Watanabe et al.   Cancer Cell International

TMPRSS13, a type II transmembrane serine protease, is inhibited by hepatocyte growth factor activator inhibitor type 1 and activates pro-hepatocyte growth factor

(2010) Tomio Hashimoto et al.   FEBS Journal

Impact of replication timing on non-CpG and CpG substitution rates in mammalian genomes

(2010) C. L. Chen et al.   GENOME RESEARCH

Plasma Insulin-Like Growth Factor-Binding Protein-2 Levels as Diagnostic and Prognostic Biomarker of Colorectal Cancer

(2010) Jyh-Ming Liou et al.   JOURNAL OF CLINICAL ENDOCRINOLOGY & METABOLISM

A method and server for predicting damaging missense mutations

(2010) Ivan A Adzhubei et al.   NATURE METHODS

HOXB13, a Target of DNMT3B, Is Methylated at an Upstream CpG Island, and Functions as a Tumor Suppressor in Primary Colorectal Tumors

(2010) Kalpana Ghoshal et al.   PLoS One

Neuroendocrine Cancer-Specific Up-Regulating Mechanism of Insulin-Like Growth Factor Binding Protein-2 in Small Cell Lung Cancer

(2009) Takuya Yazawa et al.   AMERICAN JOURNAL OF PATHOLOGY

A primate-specific POTE-actin fusion protein plays a role in apoptosis

(2009) Xiu Fen Liu et al.   APOPTOSIS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Identification of deleterious mutations within three human genomes

(2009) S. Chun et al.   GENOME RESEARCH

Detection of nonneutral substitution rates on mammalian phylogenies

(2009) K. S. Pollard et al.   GENOME RESEARCH

Upregulation of MUC4 in Cervical Squamous Cell Carcinoma: Pathologic Significance

(2009) Elizabeth G. Munro et al.   INTERNATIONAL JOURNAL OF GYNECOLOGICAL PATHOLOGY

A comprehensive catalogue of somatic mutations from a human cancer genome

(2009) Erin D. Pleasance et al.   NATURE

The cancer genome

(2009) Michael R. Stratton et al.   NATURE

Human mutation rate associated with DNA replication timing

(2009) John A Stamatoyannopoulos et al.   NATURE GENETICS

Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts

(2009) Joshua Z Levin et al.   GENOME BIOLOGY

IGFBP2 and IGFBP5 Overexpression Correlates With the Lymph Node Metastasis in T1 Breast Carcinomas

(2008) Huamin Wang et al.   Breast Journal

Deregulation of MUC4 in gastric adenocarcinoma: potential pathobiological implication in poorly differentiated non-signet ring cell type gastric cancer

(2008) S Senapati et al.   BRITISH JOURNAL OF CANCER

The kinesin KIF1B  acts downstream from EglN3 to induce apoptosis and is a potential 1p36 tumor suppressor

(2008) S. Schlisio et al.   GENES & DEVELOPMENT

KIF1Bβ Functions as a Haploinsufficient Tumor Suppressor Gene Mapped to Chromosome 1p36.2 by Inducing Apoptotic Cell Death

(2008) Arasambattu K. Munirajan et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Small C-terminal Domain Phosphatase Enhances Snail Activity through Dephosphorylation

(2008) Yadi Wu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Prognostic Significance of, and Gene and MicroRNA Expression Signatures Associated With,CEBPAMutations in Cytogenetically Normal Acute Myeloid Leukemia With High-Risk Molecular Features: A Cancer and Leukemia Group B Study

(2008) Guido Marcucci et al.   JOURNAL OF CLINICAL ONCOLOGY

A Different View on DNA Amplifications Indicates Frequent, Highly Complex, and Stable Amplicons on 12q13-21 in Glioma

(2008) U. Fischer et al.   MOLECULAR CANCER RESEARCH

PHD2Mutation and Congenital Erythrocytosis with Paraganglioma

(2008) Charline Ladroue et al.   NEW ENGLAND JOURNAL OF MEDICINE

Activation of PI3K/Akt and MAPK pathways regulates Myc-mediated transcription by phosphorylating and promoting the degradation of Mad1

(2008) J. Zhu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distinct expression patterns in hepatitis B virus- and hepatitis C virus-infected hepatocellular carcinoma

(2008) Chun-Feng Lee et al.   WORLD JOURNAL OF GASTROENTEROLOGY

SARM: a novel Toll-like receptor adaptor, is functionally conserved from arthropod to human

(2007) Loh Wei-Ching Belinda et al.   MOLECULAR IMMUNOLOGY