Accounting for individual‐specific variation in habitat‐selection studies: Efficient estimation of mixed‐effects models using Bayesian or frequentist computation

Animal movement tools (amt ): R package for managing tracking data and conducting habitat selection analyses

(2019) Johannes Signer et al.   Ecology and Evolution

Intragroup competition predicts individual foraging specialisation in a group-living mammal

(2018) Catherine E. Sheppard et al.   ECOLOGY LETTERS

Stan: A Probabilistic Programming Language

(2017) Bob Carpenter et al.   Journal of Statistical Software

Not accounting for interindividual variability can mask habitat selection patterns: a case study on black bears

(2017) Rémi Lesmerises et al.   OECOLOGIA

Penalising Model Component Complexity: A Principled, Practical Approach to Constructing Priors

(2017) Daniel Simpson et al.   STATISTICAL SCIENCE

Complex variation in habitat selection strategies among individuals driven by extrinsic factors

(2017) Edward J. Raynor et al.   Ecology and Evolution

Flexible habitat selection paves the way for a recovery of otter populations in the European Alps

(2016) Irene C. Weinberger et al.   BIOLOGICAL CONSERVATION

Hierarchical animal movement models for population-level inference

(2016) Mevin B. Hooten et al.   ENVIRONMETRICS

Marginal or conditional regression models for correlated non-normal data?

(2016) Stefanie Muff et al.   Methods in Ecology and Evolution

Integrated step selection analysis: bridging the gap between resource selection and animal movement

(2016) Tal Avgar et al.   Methods in Ecology and Evolution

Establishing the link between habitat selection and animal population dynamics

(2015) Jason Matthiopoulos et al.   ECOLOGICAL MONOGRAPHS

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Quantifying consistent individual differences in habitat selection

(2015) Martin Leclerc et al.   OECOLOGIA

Terrestrial animal tracking as an eye on life and planet

(2015) R. Kays et al.   SCIENCE

Equivalence between Step Selection Functions and Biased Correlated Random Walks for Statistical Inference on Animal Movement

(2015) Thierry Duchesne et al.   PLoS One

Bayesian analysis of measurement error models using integrated nested Laplace approximations

(2014) Stefanie Muff et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES C-APPLIED STATISTICS

Applications of step-selection functions in ecology and conservation

(2014) Henrik Thurfjell et al.   Movement Ecology

Finite-sample equivalence in statistical models for presence-only data

(2013) William Fithian et al.   Annals of Applied Statistics

Equivalence of MAXENT and Poisson Point Process Models for Species Distribution Modeling in Ecology

(2013) Ian W. Renner et al.   BIOMETRICS

Practical guidance on characterizing availability in resource selection functions under a use–availability design

(2013) Joseph M. Northrup et al.   ECOLOGY

Advancing our thinking in presence-only and used-available analysis

(2013) David Warton et al.   JOURNAL OF ANIMAL ECOLOGY

Reconciling resource utilization and resource selection functions

(2013) Mevin B. Hooten et al.   JOURNAL OF ANIMAL ECOLOGY

Quantifying the effect of habitat availability on species distributions

(2013) Geert Aarts et al.   JOURNAL OF ANIMAL ECOLOGY

Quantifying individual variation in behaviour: mixed-effect modelling approaches

(2012) Niels J. Dingemanse et al.   JOURNAL OF ANIMAL ECOLOGY

The Movebank data model for animal tracking

(2011) B. Kranstauber et al.   ENVIRONMENTAL MODELLING & SOFTWARE

Conditional Logistic Regression With Longitudinal Follow-up and Individual-Level Random Coefficients: A Stable and Efficient Two-Step Estimation Method

(2011) Radu V. Craiu et al.   JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS

An explicit link between Gaussian fields and Gaussian Markov random fields: the stochastic partial differential equation approach

(2011) Finn Lindgren et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

Comparative interpretation of count, presence-absence and point methods for species distribution models

(2011) Geert Aarts et al.   Methods in Ecology and Evolution

Poisson point process models solve the “pseudo-absence problem” for presence-only data in ecology

(2010) David I. Warton et al.   Annals of Applied Statistics

Generalized functional responses for species distributions

(2010) Jason Matthiopoulos et al.   ECOLOGY

Mixed conditional logistic regression for habitat selection studies

(2010) Thierry Duchesne et al.   JOURNAL OF ANIMAL ECOLOGY

The interpretation of habitat preference metrics under use-availability designs

(2010) H. L. Beyer et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Habitat-performance relationships: finding the right metric at a given spatial scale

(2010) J.-M. Gaillard et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Animal ecology meets GPS-based radiotelemetry: a perfect storm of opportunities and challenges

(2010) F. Cagnacci et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Correlation and studies of habitat selection: problem, red herring or opportunity?

(2010) J. Fieberg et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Bayesian inference for generalized linear mixed models

(2009) Y. Fong et al.   BIOSTATISTICS

Accounting for animal movement in estimation of resource selection functions: sampling and data analysis

(2009) James D. Forester et al.   ECOLOGY

Regression modelling of correlated data in ecology: subject-specific and population averaged response patterns

(2009) John Fieberg et al.   JOURNAL OF APPLIED ECOLOGY

Approximate Bayesian inference for latent Gaussian models by using integrated nested Laplace approximations

(2009) Håvard Rue et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

Generalized linear mixed models: a practical guide for ecology and evolution

(2009) Benjamin M. Bolker et al.   TRENDS IN ECOLOGY & EVOLUTION

Conclusions beyond support: overconfident estimates in mixed models

(2008) H. Schielzeth et al.   BEHAVIORAL ECOLOGY

Inference Methods for the Conditional Logistic Regression Model with Longitudinal Data

(2007) Radu V. Craiu et al.   BIOMETRICAL JOURNAL