Construction and analysis of degradome-dependent microRNA regulatory networks in soybean

Genome-wide analysis of GRAS transcription factor gene family in Gossypium hirsutum L.

(2018) Bin Zhang et al.   BMC GENOMICS

psRNATarget: a plant small RNA target analysis server (2017 release)

(2018) Xinbin Dai et al.   NUCLEIC ACIDS RESEARCH

Genetic improvement of the shoot architecture and yield in soya bean plants via the manipulation of GmmiR156b

(2018) Zhengxi Sun et al.   PLANT BIOTECHNOLOGY JOURNAL

Revisiting Criteria for Plant MicroRNA Annotation in the Era of Big Data

(2018) Michael J. Axtell et al.   PLANT CELL

Constitutive Expression of miR408 Improves Biomass and Seed Yield in Arabidopsis

(2018) Zhaoqing Song et al.   Frontiers in Plant Science

MicroRNA319-regulated TCPs interact with FBHs and PFT1 to activate CO transcription and control flowering time in Arabidopsis

(2017) Jie Liu et al.   PLoS Genetics

The entangled history of animal and plant microRNAs

(2016) Rodrigo S. Reis   FUNCTIONAL & INTEGRATIVE GENOMICS

Integration of omics approaches to understand oil/protein content during seed development in oilseed crops

(2016) Manju Gupta et al.   PLANT CELL REPORTS

Genome-Wide Investigation Using sRNA-Seq, Degradome-Seq and Transcriptome-Seq Reveals Regulatory Networks of microRNAs and Their Target Genes in Soybean during Soybean mosaic virus Infection

(2016) Hui Chen et al.   PLoS One

Identification of chilling-responsive microRNAs and their targets in vegetable soybean (Glycine max L.)

(2016) Shengchun Xu et al.   Scientific Reports

Small RNAs in Plant Responses to Abiotic Stresses: Regulatory Roles and Study Methods

(2015) Yee-Shan Ku et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

GmmiR156b overexpression delays flowering time in soybean

(2015) Dong Cao et al.   PLANT MOLECULAR BIOLOGY

MicroRNA167-Directed Regulation of the Auxin Response FactorsGmARF8aandGmARF8bIs Required for Soybean Nodulation and Lateral Root Development

(2015) Youning Wang et al.   PLANT PHYSIOLOGY

microRNA biogenesis, degradation and activity in plants

(2014) Meng Xie et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Soybean miR172c Targets the Repressive AP2 Transcription Factor NNC1 to ActivateENOD40Expression and Regulate Nodule Initiation

(2014) Youning Wang et al.   PLANT CELL

An Atlas of Soybean Small RNAs Identifies Phased siRNAs from Hundreds of Coding Genes

(2014) Siwaret Arikit et al.   PLANT CELL

Classification and Comparison of Small RNAs from Plants

(2013) Michael J. Axtell   Annual Review of Plant Biology

Discovery of MicroRNA169 Gene Copies in Genomes of Flowering Plants through Positional Information

(2013) Martín Calviño et al.   Genome Biology and Evolution

Ectopic Expression of miR160 Results in Auxin Hypersensitivity, Cytokinin Hyposensitivity, and Inhibition of Symbiotic Nodule Development in Soybean

(2013) M. Turner et al.   PLANT PHYSIOLOGY

Identification of soybean seed developmental stage-specific and tissue-specific miRNA targets by degradome sequencing

(2012) Md Shamimuzzaman et al.   BMC GENOMICS

Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing

(2011) Qing-Xin Song et al.   BMC PLANT BIOLOGY

Funneling of gibberellin signaling by the GRAS transcription regulator SCARECROW-LIKE 3 in theArabidopsisroot

(2011) Jung-Ok Heo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

miRBase: integrating microRNA annotation and deep-sequencing data

(2010) A. Kozomara et al.   NUCLEIC ACIDS RESEARCH

R gene-controlled host specificity in the legume-rhizobia symbiosis

(2010) S. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Global identification of microRNA–target RNA pairs by parallel analysis of RNA ends

(2008) Marcelo A German et al.   NATURE BIOTECHNOLOGY