Eukaryotic and cyanobacterial communities associated with marine snow particles in the oligotrophic Sargasso Sea

Vertical structure of plankton communities in areas of European eel larvae distribution in the Sargasso Sea

(2018) Peter Munk et al.   JOURNAL OF PLANKTON RESEARCH

Evaluation of marine zooplankton community structure through environmental DNA metabarcoding

(2018) Anni Djurhuus et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Mammoth grazers on the ocean's minuteness: a review of selective feeding using mucous meshes

(2018) Keats R. Conley et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Gelatinous plankton is important in the diet of European eel (Anguilla anguilla) larvae in the Sargasso Sea

(2018) Daniel J. Ayala et al.   Scientific Reports

High contribution of Rhizaria (Radiolaria) to vertical export in the California Current Ecosystem revealed by DNA metabarcoding

(2018) Andres Gutierrez-Rodriguez et al.   ISME Journal

Biological and physical influences on marine snowfall at the equator

(2017) R. Kiko et al.   Nature Geoscience

Influence of diatom diversity on the ocean biological carbon pump

(2017) Paul Tréguer et al.   Nature Geoscience

Metabarcoding of marine zooplankton: prospects, progress and pitfalls

(2016) Ann Bucklin et al.   JOURNAL OF PLANKTON RESEARCH

Is metabarcoding suitable for estuarine plankton monitoring? A comparative study with microscopy

(2016) David Abad et al.   MARINE BIOLOGY

Plankton networks driving carbon export in the oligotrophic ocean

(2016) Lionel Guidi et al.   NATURE

In situ imaging reveals the biomass of giant protists in the global ocean

(2016) Tristan Biard et al.   NATURE

18S rRNA V9 metabarcoding for diet characterization: a critical evaluation with two sympatric zooplanktivorous fish species

(2016) Aitor Albaina et al.   Ecology and Evolution

Rethinking the marine carbon cycle: Factoring in the multifarious lifestyles of microbes

(2015) A. Z. Worden et al.   SCIENCE

Sparse and Compositionally Robust Inference of Microbial Ecological Networks

(2015) Zachary D. Kurtz et al.   PLoS Computational Biology

Characterization of the 18S rRNA Gene for Designing Universal Eukaryote Specific Primers

(2014) Kenan Hadziavdic et al.   PLoS One

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Effect of Type and Concentration of Ballasting Particles on Sinking Rate of Marine Snow Produced by the Appendicularian Oikopleura dioica

(2013) Fabien Lombard et al.   PLoS One

mvabund- anRpackage for model-based analysis of multivariate abundance data

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Effects of phytoplankton community on production, size, and export of large aggregates: A world-ocean analysis

(2011) Lionel Guidi et al.   LIMNOLOGY AND OCEANOGRAPHY

Distribution and production of plankton communities in the subtropical convergence zone of the Sargasso Sea. II. Protozooplankton and copepods

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Distribution and production of plankton communities in the subtropical convergence zone of the Sargasso Sea. I. Phytoplankton and bacterioplankton

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Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Ballast, sinking velocity, and apparent diffusivity within marine snow and zooplankton fecal pellets: Implications for substrate turnover by attached bacteria

(2010) Helle Ploug et al.   LIMNOLOGY AND OCEANOGRAPHY

The Underwater Vision Profiler 5: An advanced instrument for high spatial resolution studies of particle size spectra and zooplankton

(2010) Marc Picheral et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Improving indicator species analysis by combining groups of sites

(2010) Miquel De Cáceres et al.   OIKOS

Role of macroscopic particles in deep-sea oxygen consumption

(2010) A. B. Bochdansky et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Associations between species and groups of sites: indices and statistical inference

(2009) Miquel De Cáceres et al.   ECOLOGY

Lateral POC transport and consumption in surface and deep waters of the Canary Current region: A box model study

(2009) I. J. Alonso-González et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Quantification of Diatom and Dinoflagellate Biomasses in Coastal Marine Seawater Samples by Real-Time PCR

(2008) A. Godhe et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Database indexing for production MegaBLAST searches

(2008) Aleksandr Morgulis et al.   BIOINFORMATICS

INVITED REVIEW: Molecular analysis of predation: a review of best practice for DNA-based approaches

(2008) R. A. KING et al.   MOLECULAR ECOLOGY