Regulatory mechanisms underlying coordination of amino acid and glucose catabolism in Escherichia coli
出版年份 2019 全文链接
标题
Regulatory mechanisms underlying coordination of amino acid and glucose catabolism in Escherichia coli
作者
关键词
-
出版物
Nature Communications
Volume 10, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2019-07-26
DOI
10.1038/s41467-019-11331-5
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A Map of Protein-Metabolite Interactions Reveals Principles of Chemical Communication
- (2018) Ilaria Piazza et al. CELL
- High-throughput metabolomic analysis predicts mode of action of uncharacterized antimicrobial compounds
- (2018) Mattia Zampieri et al. Science Translational Medicine
- Metabolic enzyme cost explains variable trade-offs between microbial growth rate and yield
- (2018) Meike T. Wortel et al. PLoS Computational Biology
- Temporal fluxomics reveals oscillations in TCA cycle flux throughout the mammalian cell cycle
- (2017) Eunyong Ahn et al. Molecular Systems Biology
- Genomewide landscape of gene–metabolome associations in Escherichia coli
- (2017) Tobias Fuhrer et al. Molecular Systems Biology
- Effect of flow and peristaltic mixing on bacterial growth in a gut-like channel
- (2016) Jonas Cremer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Glucose becomes one of the worst carbon sources for E.coli on poor nitrogen sources due to suboptimal levels of cAMP
- (2016) Anat Bren et al. Scientific Reports
- MID Max: LC–MS/MS Method for Measuring the Precursor and Product Mass Isotopomer Distributions of Metabolic Intermediates and Cofactors for Metabolic Flux Analysis Applications
- (2015) Douglas McCloskey et al. ANALYTICAL CHEMISTRY
- Dynamic exometabolome analysis reveals active metabolic pathways in non-replicating mycobacteria
- (2015) Michael Zimmermann et al. ENVIRONMENTAL MICROBIOLOGY
- Overflow metabolism in Escherichia coli results from efficient proteome allocation
- (2015) Markus Basan et al. NATURE
- Real-time metabolome profiling of the metabolic switch between starvation and growth
- (2015) Hannes Link et al. NATURE METHODS
- Understanding carbon catabolite repression in Escherichia coli using quantitative models
- (2015) A. Kremling et al. TRENDS IN MICROBIOLOGY
- Pseudo-transition Analysis Identifies the Key Regulators of Dynamic Metabolic Adaptations from Steady-State Data
- (2015) Luca Gerosa et al. Cell Systems
- Quantification and Mass Isotopomer Profiling of α-Keto Acids in Central Carbon Metabolism
- (2014) Michael Zimmermann et al. ANALYTICAL CHEMISTRY
- DFBAlab: a fast and reliable MATLAB code for dynamic flux balance analysis
- (2014) Jose A Gomez et al. BMC BIOINFORMATICS
- Quantifying Absolute Protein Synthesis Rates Reveals Principles Underlying Allocation of Cellular Resources
- (2014) Gene-Wei Li et al. CELL
- Cheese Rind Communities Provide Tractable Systems for In Situ and In Vitro Studies of Microbial Diversity
- (2014) Benjamin E. Wolfe et al. CELL
- Constraint-based models predict metabolic and associated cellular functions
- (2014) Aarash Bordbar et al. NATURE REVIEWS GENETICS
- Syntrophic exchange in synthetic microbial communities
- (2014) M. T. Mee et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Shigellareroutes host cell central metabolism to obtain high-flux nutrient supply for vigorous intracellular growth
- (2014) David Kentner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Metabolic Resource Allocation in Individual Microbes Determines Ecosystem Interactions and Spatial Dynamics
- (2014) William R. Harcombe et al. Cell Reports
- Structural Basis for Enzyme I Inhibition by α-Ketoglutarate
- (2013) Vincenzo Venditti et al. ACS Chemical Biology
- An integrated computational approach for metabolic flux analysis coupled with inference of tandem-MS collisional fragments
- (2013) N. Tepper et al. BIOINFORMATICS
- Non-stationary13C-metabolic flux ratio analysis
- (2013) Manuel Hörl et al. BIOTECHNOLOGY AND BIOENGINEERING
- L-glutamine provides acid resistance for Escherichia coli through enzymatic release of ammonia
- (2013) Peilong Lu et al. CELL RESEARCH
- Characterization of casein hydrolysates derived from enzymatic hydrolysis
- (2013) Jinshui Wang et al. Chemistry Central Journal
- Dissecting specific and global transcriptional regulation of bacterial gene expression
- (2013) L. Gerosa et al. Molecular Systems Biology
- Temporal system-level organization of the switch from glycolytic to gluconeogenic operation in yeast
- (2013) G. G. Zampar et al. Molecular Systems Biology
- Pyrimidine homeostasis is accomplished by directed overflow metabolism
- (2013) Marshall Louis Reaves et al. NATURE
- Coordination of bacterial proteome with metabolism by cyclic AMP signalling
- (2013) Conghui You et al. NATURE
- Systematic identification of allosteric protein-metabolite interactions that control enzyme activity in vivo
- (2013) Hannes Link et al. NATURE BIOTECHNOLOGY
- Functioning of a metabolic flux sensor in Escherichia coli
- (2013) K. Kochanowski et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Ability of Flux Balance Analysis to Predict Evolution of Central Metabolism Scales with the Initial Distance to the Optimum
- (2013) William R. Harcombe et al. PLoS Computational Biology
- Extensive exometabolome analysis reveals extended overflow metabolism in various microorganisms
- (2012) Nicole Paczia et al. Microbial Cell Factories
- Detection of transcriptional triggers in the dynamics of microbial growth: application to the respiratorily versatile bacterium Shewanella oneidensis
- (2012) Qasim K. Beg et al. NUCLEIC ACIDS RESEARCH
- Multidimensional Optimality of Microbial Metabolism
- (2012) R. Schuetz et al. SCIENCE
- Evolution of Stress Response in the Face of Unreliable Environmental Signals
- (2012) Markus Arnoldini et al. PLoS Computational Biology
- High-Throughput, Accurate Mass Metabolome Profiling of Cellular Extracts by Flow Injection–Time-of-Flight Mass Spectrometry
- (2011) Tobias Fuhrer et al. ANALYTICAL CHEMISTRY
- A comprehensive genome-scale reconstruction of Escherichia coli metabolism--2011
- (2011) J. D. Orth et al. Molecular Systems Biology
- α-ketoglutarate coordinates carbon and nitrogen utilization via enzyme I inhibition
- (2011) Christopher D Doucette et al. Nature Chemical Biology
- Condition-Dependent Cell Volume and Concentration of Escherichia coli to Facilitate Data Conversion for Systems Biology Modeling
- (2011) Benjamin Volkmer et al. PLoS One
- Ultrahigh Performance Liquid Chromatography−Tandem Mass Spectrometry Method for Fast and Robust Quantification of Anionic and Aromatic Metabolites
- (2010) Joerg Martin Buescher et al. ANALYTICAL CHEMISTRY
- Yeast Dynamic Metabolic Flux Measurement in Nutrient-Rich Media by Hplc and Accelerator Mass Spectrometry
- (2010) Benjamin J. Stewart et al. ANALYTICAL CHEMISTRY
- Functional dissection of Escherichia coli phosphotransacetylase structural domains and analysis of key compounds involved in activity regulation
- (2010) Valeria Alina Campos-Bermudez et al. FEBS Journal
- 13C-based metabolic flux analysis
- (2009) Nicola Zamboni et al. Nature Protocols
- Kinetic flux profiling for quantitation of cellular metabolic fluxes
- (2008) Jie Yuan et al. Nature Protocols
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started