Discovering and Mapping the Modified Nucleotides That Comprise the Epitranscriptome of mRNA
出版年份 2019 全文链接
标题
Discovering and Mapping the Modified Nucleotides That Comprise the Epitranscriptome of mRNA
作者
关键词
-
出版物
Cold Spring Harbor Perspectives in Biology
Volume 11, Issue 6, Pages a032201
出版商
Cold Spring Harbor Laboratory
发表日期
2019-06-04
DOI
10.1101/cshperspect.a032201
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Existence of Internal N7-Methylguanosine Modification in mRNA Determined by Differential Enzyme Treatment Coupled with Mass Spectrometry Analysis
- (2018) Jie-Mei Chu et al. ACS Chemical Biology
- Tet2 promotes pathogen infection-induced myelopoiesis through mRNA oxidation
- (2018) Qicong Shen et al. NATURE
- Distinguishing RNA modifications from noise in epitranscriptome maps
- (2018) Anya V Grozhik et al. Nature Chemical Biology
- Corrigendum: Nm-seq maps 2′-O-methylation sites in human mRNA with base precision
- (2018) Qing Dai et al. NATURE METHODS
- Statistically robust methylation calling for whole-transcriptome bisulfite sequencing reveals distinct methylation patterns for mouse RNAs
- (2017) Carine Legrand et al. GENOME RESEARCH
- Base-Resolution Mapping Reveals Distinct m 1 A Methylome in Nuclear- and Mitochondrial-Encoded Transcripts
- (2017) Xiaoyu Li et al. MOLECULAR CELL
- Epitranscriptomics: Shrinking maps of RNA modifications
- (2017) Anya V. Grozhik et al. NATURE
- The m1A landscape on cytosolic and mitochondrial mRNA at single-base resolution
- (2017) Modi Safra et al. NATURE
- Reversible RNA modifications in meiosis and pluripotency
- (2017) Arne Klungland et al. NATURE METHODS
- Nm-seq maps 2′-O-methylation sites in human mRNA with base precision
- (2017) Qing Dai et al. NATURE METHODS
- MODOMICS: a database of RNA modification pathways. 2017 update
- (2017) Pietro Boccaletto et al. NUCLEIC ACIDS RESEARCH
- Emerging links between m6A and misregulated mRNA methylation in cancer
- (2017) Samie R. Jaffrey et al. Genome Medicine
- RNA modifications go viral
- (2017) Nandan S. Gokhale et al. PLoS Pathogens
- Regulation and function of CMTR1-dependent mRNA cap methylation
- (2017) Francisco Inesta-Vaquera et al. Wiley Interdisciplinary Reviews-RNA
- Improvements to the HITS-CLIP protocol eliminate widespread mispriming artifacts
- (2016) Austin E. Gillen et al. BMC GENOMICS
- Pseudouridylation meets next-generation sequencing
- (2016) Maryam Zaringhalam et al. METHODS
- The dynamic N1-methyladenosine methylome in eukaryotic messenger RNA
- (2016) Dan Dominissini et al. NATURE
- Transcriptome-wide mapping reveals reversible and dynamic N1-methyladenosine methylome
- (2016) Xiaoyu Li et al. Nature Chemical Biology
- Transcriptome-wide distribution and function of RNA hydroxymethylcytosine
- (2016) B. Delatte et al. SCIENCE
- Chemical pulldown reveals dynamic pseudouridylation of the mammalian transcriptome
- (2015) Xiaoyu Li et al. Nature Chemical Biology
- Efficient and quantitative high-throughput tRNA sequencing
- (2015) Guanqun Zheng et al. NATURE METHODS
- Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome
- (2015) Bastian Linder et al. NATURE METHODS
- The reverse transcription signature ofN-1-methyladenosine in RNA-Seq is sequence dependent
- (2015) Ralf Hauenschild et al. NUCLEIC ACIDS RESEARCH
- Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling
- (2014) Wei Zhao et al. BMC GENOMICS
- Influence of RNA extraction methods and library selection schemes on RNA-seq data
- (2014) Marc Sultan et al. BMC GENOMICS
- Transcriptome-wide Mapping Reveals Widespread Dynamic-Regulated Pseudouridylation of ncRNA and mRNA
- (2014) Schraga Schwartz et al. CELL
- Tet-Mediated Formation of 5-Hydroxymethylcytosine in RNA
- (2014) Lijuan Fu et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Interferon-Induced Ifit Proteins: Their Role in Viral Pathogenesis
- (2014) Volker Fensterl et al. JOURNAL OF VIROLOGY
- Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells
- (2014) Thomas M. Carlile et al. NATURE
- Transcriptome-Wide Mapping of Pseudouridines: Pseudouridine Synthases Modify Specific mRNAs in S. cerevisiae
- (2014) Alexander F. Lovejoy et al. PLoS One
- An Active Role for the Ribosome in Determining the Fate of Oxidized mRNA
- (2014) Carrie L. Simms et al. Cell Reports
- HITS-CLIP and Integrative Modeling Define the Rbfox Splicing-Regulatory Network Linked to Brain Development and Autism
- (2014) Sebastien M. Weyn-Vanhentenryck et al. Cell Reports
- Ifit1 Inhibits Japanese Encephalitis Virus Replication through Binding to 5' Capped 2'-O Unmethylated RNA
- (2013) T. Kimura et al. JOURNAL OF VIROLOGY
- Identification of direct targets and modified bases of RNA cytosine methyltransferases
- (2013) Vahid Khoddami et al. NATURE BIOTECHNOLOGY
- Long non-coding RNAs as targets for cytosine methylation
- (2013) Thomas Amort et al. RNA Biology
- HAMR: high-throughput annotation of modified ribonucleotides
- (2013) P. Ryvkin et al. RNA
- Probing N6-methyladenosine RNA modification status at single nucleotide resolution in mRNA and long noncoding RNA
- (2013) N. Liu et al. RNA
- NSun2-Mediated Cytosine-5 Methylation of Vault Noncoding RNA Determines Its Processing into Regulatory Small RNAs
- (2013) Shobbir Hussain et al. Cell Reports
- Transcriptome-Wide Mapping of 5-methylcytidine RNA Modifications in Bacteria, Archaea, and Yeast Reveals m5C within Archaeal mRNAs
- (2013) Sarit Edelheit et al. PLoS Genetics
- Sequestration by IFIT1 Impairs Translation of 2′O-unmethylated Capped RNA
- (2013) Matthias Habjan et al. PLoS Pathogens
- Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3′ UTRs and near Stop Codons
- (2012) Kate D. Meyer et al. CELL
- Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq
- (2012) Dan Dominissini et al. NATURE
- Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA
- (2012) Jeffrey E. Squires et al. NUCLEIC ACIDS RESEARCH
- Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data
- (2011) Chaolin Zhang et al. NATURE BIOTECHNOLOGY
- Ribose 2′-O-methylation provides a molecular signature for the distinction of self and non-self mRNA dependent on the RNA sensor Mda5
- (2011) Roland Züst et al. NATURE IMMUNOLOGY
- 2′-O-ribose methylation of cap2 in human: function and evolution in a horizontally mobile family
- (2011) Maria Werner et al. NUCLEIC ACIDS RESEARCH
- Myc up-regulates formation of the mRNA methyl cap
- (2010) Victoria H. Cowling BIOCHEMICAL SOCIETY TRANSACTIONS
- A comparison between ribo-minus RNA-sequencing and polyA-selected RNA-sequencing
- (2010) Peng Cui et al. GENOMICS
- Characterization of hMTr1, a Human Cap1 2′-O-Ribose Methyltransferase
- (2010) François Bélanger et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- 2′-O methylation of the viral mRNA cap evades host restriction by IFIT family members
- (2010) Stephane Daffis et al. NATURE
- Enhanced mRNA cap methylation increases Cyclin D1 expression and promotes cell transformation
- (2009) V H Cowling ONCOGENE
- The human interferon-regulated ISG95 protein interacts with RNA polymerase II and shows methyltransferase activity
- (2008) Thais Haline-Vaz et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Incorporation of Pseudouridine Into mRNA Yields Superior Nonimmunogenic Vector With Increased Translational Capacity and Biological Stability
- (2008) Katalin Karikó et al. MOLECULAR THERAPY
- RNA cytosine methylation analysis by bisulfite sequencing
- (2008) M. Schaefer et al. NUCLEIC ACIDS RESEARCH
- MTA Is an Arabidopsis Messenger RNA Adenosine Methylase and Interacts with a Homolog of a Sex-Specific Splicing Factor
- (2008) S. Zhong et al. PLANT CELL
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now