Fecal Short-Chain Fatty Acids Are Not Predictive of Colonic Tumor Status and Cannot Be Predicted Based on Bacterial Community Structure

Causal relationships among the gut microbiome, short-chain fatty acids and metabolic diseases

(2019) Serena Sanna et al.   NATURE GENETICS

Is dietary fibre truly protective against colon cancer? A systematic review and meta-analysis

(2018) Vincenza Gianfredi et al.   INTERNATIONAL JOURNAL OF FOOD SCIENCES AND NUTRITION

Dietary Fiber Treatment Corrects the Composition of Gut Microbiota, Promotes SCFA Production, and Suppresses Colon Carcinogenesis

(2018) Faraz Bishehsari et al.   Genes

Smoking Habits are Strongly Associated With Colorectal Polyps in a Population-based Case-control Study

(2017) Naomi Fliss-Isakov et al.   JOURNAL OF CLINICAL GASTROENTEROLOGY

MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets

(2017) Martin Steinegger et al.   NATURE BIOTECHNOLOGY

Normalization of the microbiota in patients after treatment for colonic lesions

(2017) Marc A. Sze et al.   Microbiome

Cancer statistics, 2016

(2016) Rebecca L. Siegel et al.   CA-A CANCER JOURNAL FOR CLINICIANS

Interleukin-15 promotes intestinal dysbiosis with butyrate deficiency associated with increased susceptibility to colitis

(2016) Marlies Meisel et al.   ISME Journal

Reduction of Murine Colon Tumorigenesis Driven by EnterotoxigenicBacteroides fragilisUsing Cefoxitin Treatment

(2016) Christina E. DeStefano Shields et al.   JOURNAL OF INFECTIOUS DISEASES

Diet, microorganisms and their metabolites and colon cancer

(2016) Stephen J. D. O'Keefe   Nature Reviews Gastroenterology & Hepatology

Microbiota-based model improves the sensitivity of fecal immunochemical test for detecting colonic lesions

(2016) Nielson T. Baxter et al.   Genome Medicine

Variable responses of human microbiomes to dietary supplementation with resistant starch

(2016) A. Venkataraman et al.   Microbiome

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

(2015) Dinghua Li et al.   BIOINFORMATICS

Diet and Lifestyle in Survivors of Colorectal Cancer

(2015) Junga Lee et al.   HEMATOLOGY-ONCOLOGY CLINICS OF NORTH AMERICA

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

The Gut Microbiome Modulates Colon Tumorigenesis

(2013) J. P. Zackular et al.   mBio

Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY