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Simple mechanics of protein machines

期刊

出版社

ROYAL SOC
DOI: 10.1098/rsif.2019.0244

关键词

complex systems; self-organization; elastic networks; mechanochemical motions in enzymes; molecular motors; allosteric effects

资金

  1. Ministry of Education, Culture, Sports, Science and Technology (MEXT), Japan, through the World Premier International Research Center (WPI) Initiative
  2. JSPS KAKENHI [JP19K03765, JP16K05518]

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While belonging to the nanoscale, protein machines are so complex that tracing even a small fraction of their cycle requires weeks of calculations on super-computers. Surprisingly, many aspects of their operation can be however already reproduced by using very simple mechanical models of elastic networks. The analysis suggests that, similar to other self-organized complex systems, functional collective dynamics in such proteins is effectively reduced to a low-dimensional attractive manifold.

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