Improved phylogenomic sampling of free-living nematodes enhances resolution of higher-level nematode phylogeny
出版年份 2019 全文链接
标题
Improved phylogenomic sampling of free-living nematodes enhances resolution of higher-level nematode phylogeny
作者
关键词
Nematoda, Phylogenomic, Free-living, Parasitism
出版物
BMC EVOLUTIONARY BIOLOGY
Volume 19, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2019-06-13
DOI
10.1186/s12862-019-1444-x
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Development of Phasmarhabditis hermaphrodita (and members of the Phasmarhabditis genus) as new genetic model nematodes to study the genetic basis of parasitism
- (2018) P. Andrus et al. JOURNAL OF HELMINTHOLOGY
- Phylogenetic position of the enigmatic deep-sea nematode order Rhaptothyreida: A molecular analysis
- (2018) Daniel Leduc et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Phylogenomics offers resolution of major tunicate relationships
- (2018) Kevin M. Kocot et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Description of Myolaimus mycophilus Slos & Bert sp. n. (Rhabditida: Myolaimidae)
- (2018) Dieter Slos et al. NEMATOLOGY
- Comparative genomics of the major parasitic worms
- (2018) NATURE GENETICS
- Morphology, taxonomy and phylogeny of the enigmatic genus Aulolaimus de Man, 1880 (Nematoda, Aulolaimidae)
- (2018) Joaquín Abolafia et al. ZOOLOGISCHER ANZEIGER
- Current Understanding of Ecdysozoa and its Internal Phylogenetic Relationships
- (2017) Gonzalo Giribet et al. INTEGRATIVE AND COMPARATIVE BIOLOGY
- Phylogenetic analysis of two Plectus mitochondrial genomes (Nematoda: Plectida) supports a sister group relationship between Plectida and Rhabditida within Chromadorea
- (2017) Jiyeon Kim et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- WormBase 2017: molting into a new stage
- (2017) Raymond Y N Lee et al. NUCLEIC ACIDS RESEARCH
- How Can We Understand the Genomic Basis of Nematode Parasitism?
- (2017) Mark Viney TRENDS IN PARASITOLOGY
- Phylogenetic position of the Paramicrolaimidae, description of a new Paramicrolaimus species and erection of a new order to accommodate the Microlaimoidea (Nematoda: Chromadorea)
- (2017) Daniel Leduc et al. ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY
- Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus
- (2017) Yuki Yoshida et al. PLOS BIOLOGY
- Independent origins of parasitism in Animalia
- (2016) Sara B. Weinstein et al. Biology Letters
- A transcriptomic insight into the infective juvenile stage of the insect parasitic nematode, Heterorhabditis indica
- (2016) Vishal S. Somvanshi et al. BMC GENOMICS
- The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update
- (2016) Enis Afgan et al. NUCLEIC ACIDS RESEARCH
- Spiralian Phylogeny Informs the Evolution of Microscopic Lineages
- (2015) Christopher E. Laumer et al. CURRENT BIOLOGY
- Evolution of Feeding Structures in the Marine Nematode Order Enoplida
- (2015) Ashleigh B. Smythe INTEGRATIVE AND COMPARATIVE BIOLOGY
- The Pfam protein families database: towards a more sustainable future
- (2015) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Mitochondrial genomes advance phylogenetic hypotheses for Tylenchina (Nematoda: Chromadorea)
- (2015) Jiyeon Kim et al. ZOOLOGICA SCRIPTA
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- FASconCAT-G: extensive functions for multiple sequence alignment preparations concerning phylogenetic studies
- (2014) Patrick Kück et al. Frontiers in Zoology
- IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
- (2014) Lam-Tung Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- A transcriptome approach to ecdysozoan phylogeny
- (2014) Janus Borner et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Helminth.net: expansions to Nematode.net and an introduction to Trematode.net
- (2014) John Martin et al. NUCLEIC ACIDS RESEARCH
- What helminth genomes have taught us about parasite evolution
- (2014) MAGDALENA ZAROWIECKI et al. PARASITOLOGY
- The evolution of parasitism in Nematoda
- (2014) MARK BLAXTER et al. PARASITOLOGY
- Swedish Plectida (Nematoda). Part 6. Neocamacolaimus parasiticus gen. n., sp. n.
- (2014) Oleksandr Holovachov et al. ZOOTAXA
- Dispersal and gene flow in free-living marine nematodes
- (2013) Sofie Derycke et al. Frontiers in Zoology
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
- (2013) Brian J Haas et al. Nature Protocols
- Assessing the Response of Nematode Communities to Climate Change-Driven Warming: A Microcosm Experiment
- (2013) Ruth Gingold et al. PLoS One
- The Magnitude of Global Marine Species Diversity
- (2012) Ward Appeltans et al. CURRENT BIOLOGY
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Greater coverage of the phylum Nematoda in SSU rDNA studies
- (2011) Suzanne Donn et al. BIOLOGY AND FERTILITY OF SOILS
- Monophyly of clade III nematodes is not supported by phylogenetic analysis of complete mitochondrial genome sequences
- (2011) Joong-Ki Park et al. BMC GENOMICS
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Systematic affinity of the sea urchin parasite, Echinomermella matsi Jones & Hagen (Enoplida: Echinomermellidae)
- (2011) George Poinar et al. NEMATOLOGY
- Genomics and transcriptomics across the diversity of the Nematoda
- (2011) M. BLAXTER et al. PARASITE IMMUNOLOGY
- Two new species of creagrocercid nematodes parasitic in earthworms, with comments on the phylogenetic affiliations of the Creagrocercidae Baylis, 1943
- (2011) E. S. Ivanova et al. SYSTEMATIC PARASITOLOGY
- Evolution of embryonic development in nematodes
- (2011) Jens Schulze et al. EvoDevo
- Moving towards a complete molecular framework of the Nematoda: a focus on the Enoplida and early-branching clades
- (2010) Holly M Bik et al. BMC EVOLUTIONARY BIOLOGY
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- Second-generation environmental sequencing unmasks marine metazoan biodiversity
- (2010) Vera G. Fonseca et al. Nature Communications
- HaMStR: Profile hidden markov model based search for orthologs in ESTs
- (2009) Ingo Ebersberger et al. BMC EVOLUTIONARY BIOLOGY
- A phylogenetic tree of nematodes based on about 1200 full-length small subunit ribosomal DNA sequences
- (2009) Hanny van Megen et al. NEMATOLOGY
- Assessing the root of bilaterian animals with scalable phylogenomic methods
- (2009) A. Hejnol et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Halomonhystera parasitica n. sp. (Nematoda: Monhysteridae), a parasite of Talorchestia brito (Crustacea: Talitridae) in Portugal
- (2009) George Poinar et al. SYSTEMATIC PARASITOLOGY
- The mitochondrial genome sequence of Enterobius vermicularis (Nematoda: Oxyurida) — An idiosyncratic gene order and phylogenetic information for chromadorean nematodes
- (2008) Seokha Kang et al. GENE
- Broad phylogenomic sampling improves resolution of the animal tree of life
- (2008) Casey W. Dunn et al. NATURE
- On the Extent and Origins of Genic Novelty in the Phylum Nematoda
- (2008) James Wasmuth et al. PLoS Neglected Tropical Diseases
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