In silico identification of metabolic engineering strategies for improved lipid production in Yarrowia lipolytica by genome-scale metabolic modeling
出版年份 2019 全文链接
标题
In silico identification of metabolic engineering strategies for improved lipid production in Yarrowia lipolytica by genome-scale metabolic modeling
作者
关键词
Genome-scale modeling, Systems biology, Metabolic engineering, <em class="EmphasisTypeItalic ">Yarrowia lipolytica</em>, eMOMA, Lipid, Non-conventional yeast, TAG
出版物
Biotechnology for Biofuels
Volume 12, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2019-07-25
DOI
10.1186/s13068-019-1518-4
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Production of oils and fats by oleaginous microorganisms with an emphasis given to the potential of the nonconventional yeast Yarrowia lipolytica
- (2018) E. Carsanba et al. CRITICAL REVIEWS IN BIOTECHNOLOGY
- Modulation of the Glycerol Phosphate availability led to concomitant reduction in the citric acid excretion and increase in lipid content and yield in Yarrowia lipolytica
- (2018) Rana Sagnak et al. JOURNAL OF BIOTECHNOLOGY
- Functional genomics for the oleaginous yeast Yarrowia lipolytica
- (2018) Kurt Patterson et al. METABOLIC ENGINEERING
- Predicting the accumulation of storage compounds by Rhodococcus jostii RHA1 in the feast-famine growth cycles using genome-scale flux balance analysis
- (2018) Mohammad Tajparast et al. PLoS One
- Metabolic engineering in the host Yarrowia lipolytica
- (2018) Ahmad M. Abdel-Mawgoud et al. METABOLIC ENGINEERING
- New approach for understanding genome variations in KEGG
- (2018) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- Lipid production in Yarrowia lipolytica is maximized by engineering cytosolic redox metabolism
- (2017) Kangjian Qiao et al. NATURE BIOTECHNOLOGY
- Metabolic Engineering of Oleaginous Yeasts for Production of Fuels and Chemicals
- (2017) Shuobo Shi et al. Frontiers in Microbiology
- Modelling microbial metabolic rewiring during growth in a complex medium
- (2016) Marco Fondi et al. BMC GENOMICS
- Multi-omics analysis reveals regulators of the response to nitrogen limitation in Yarrowia lipolytica
- (2016) Kyle R. Pomraning et al. BMC GENOMICS
- Engineering Cellular Metabolism
- (2016) Jens Nielsen et al. CELL
- Metabolic engineering of microbial competitive advantage for industrial fermentation processes
- (2016) A. Joe Shaw et al. SCIENCE
- Standardized Markerless Gene Integration for Pathway Engineering in Yarrowia lipolytica
- (2016) Cory Schwartz et al. ACS Synthetic Biology
- The Impact of Chromatin Dynamics on Cas9-Mediated Genome Editing in Human Cells
- (2016) René M. Daer et al. ACS Synthetic Biology
- Synthetic RNA Polymerase III Promoters Facilitate High-Efficiency CRISPR–Cas9-Mediated Genome Editing in Yarrowia lipolytica
- (2016) Cory M. Schwartz et al. ACS Synthetic Biology
- Single cell oil production on molasses by Yarrowia lipolytica strains overexpressing DGA2 in multicopy
- (2015) Peter Gajdoš et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Logical transformation of genome-scale metabolic models for gene level applications and analysis
- (2015) Cheng Zhang et al. BIOINFORMATICS
- Transcriptomics-based strain optimization tool for designing secondary metabolite overproducing strains ofStreptomyces coelicolor
- (2015) Minsuk Kim et al. BIOTECHNOLOGY AND BIOENGINEERING
- Genome-scale metabolic model of Rhodococcus jostii RHA1 (iMT1174) to study the accumulation of storage compounds during nitrogen-limited condition
- (2015) Mohammad Tajparast et al. BMC Systems Biology
- Optimization of lipid production with a genome-scale model of Yarrowia lipolytica
- (2015) Martin Kavšček et al. BMC Systems Biology
- Engineering of oleaginous organisms for lipid production
- (2015) Jennifer Levering et al. CURRENT OPINION IN BIOTECHNOLOGY
- Engineering lipid overproduction in the oleaginous yeast Yarrowia lipolytica
- (2015) Kangjian Qiao et al. METABOLIC ENGINEERING
- The oxidative pentose phosphate pathway is the primary source of NADPH for lipid overproduction from glucose in Yarrowia lipolytica
- (2015) Thomas M. Wasylenko et al. METABOLIC ENGINEERING
- In SilicoConstraint-Based Strain Optimization Methods: the Quest for Optimal Cell Factories
- (2015) Paulo Maia et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Systems strategies for developing industrial microbial strains
- (2015) Sang Yup Lee et al. NATURE BIOTECHNOLOGY
- BiGG Models: A platform for integrating, standardizing and sharing genome-scale models
- (2015) Zachary A. King et al. NUCLEIC ACIDS RESEARCH
- Microbial lipid-based lignocellulosic biorefinery: feasibility and challenges
- (2015) Mingjie Jin et al. TRENDS IN BIOTECHNOLOGY
- Comprehensive Metabolomic, Lipidomic and Microscopic Profiling of Yarrowia lipolytica during Lipid Accumulation Identifies Targets for Increased Lipogenesis
- (2015) Kyle R. Pomraning et al. PLoS One
- The role of malic enzyme as the provider of NADPH in oleaginous microorganisms: a reappraisal and unsolved problems
- (2014) Colin Ratledge BIOTECHNOLOGY LETTERS
- Enhanced lipid accumulation in the yeast Yarrowia lipolytica by over-expression of ATP:citrate lyase from Mus musculus
- (2014) Huaiyuan Zhang et al. JOURNAL OF BIOTECHNOLOGY
- Constraint-based models predict metabolic and associated cellular functions
- (2014) Aarash Bordbar et al. NATURE REVIEWS GENETICS
- Harnessing Yarrowia lipolytica lipogenesis to create a platform for lipid and biofuel production
- (2014) John Blazeck et al. Nature Communications
- Advancing oleaginous microorganisms to produce lipid via metabolic engineering technology
- (2013) Ming-Hua Liang et al. PROGRESS IN LIPID RESEARCH
- COFACTOR MODIFICATION ANALYSIS: A COMPUTATIONAL FRAMEWORK TO IDENTIFY COFACTOR SPECIFICITY ENGINEERING TARGETS FOR STRAIN IMPROVEMENT
- (2013) MEIYAPPAN LAKSHMANAN et al. Journal of Bioinformatics and Computational Biology
- Efficient homologous recombination with short length flanking fragments in Ku70 deficient Yarrowia lipolytica strains
- (2012) Jonathan Verbeke et al. BIOTECHNOLOGY LETTERS
- A genome-scale metabolic model of the lipid-accumulating yeast Yarrowia lipolytica
- (2012) Nicolas Loira et al. BMC Systems Biology
- Engineering the push and pull of lipid biosynthesis in oleaginous yeast Yarrowia lipolytica for biofuel production
- (2012) Mitchell Tai et al. METABOLIC ENGINEERING
- Reconstruction and In Silico Analysis of Metabolic Network for an Oleaginous Yeast, Yarrowia lipolytica
- (2012) Pengcheng Pan et al. PLoS One
- A multi-omic map of the lipid-producing yeast Rhodosporidium toruloides
- (2012) Zhiwei Zhu et al. Nature Communications
- Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0
- (2011) Jan Schellenberger et al. Nature Protocols
- Phosphate-limitation mediated lipid production by Rhodosporidium toruloides
- (2010) Siguo Wu et al. BIORESOURCE TECHNOLOGY
- Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models
- (2010) Nathan E Lewis et al. Molecular Systems Biology
- What is flux balance analysis?
- (2010) Jeffrey D Orth et al. NATURE BIOTECHNOLOGY
- A protocol for generating a high-quality genome-scale metabolic reconstruction
- (2010) Ines Thiele et al. Nature Protocols
- Lipids from heterotrophic microbes: advances in metabolism research
- (2010) Matyas Kosa et al. TRENDS IN BIOTECHNOLOGY
- Yarrowia lipolytica as a model for bio-oil production
- (2009) Athanasios Beopoulos et al. PROGRESS IN LIPID RESEARCH
- Perspectives of microbial oils for biodiesel production
- (2008) Qiang Li et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
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