Metatranscriptomics of the Hu sheep rumen microbiome reveals novel cellulases

Genomically Defined Paenibacillus polymyxa ND24 for Efficient Cellulase Production Utilizing Sugarcane Bagasse as a Substrate

(2018) Varsha Bohra et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen

(2018) Robert D. Stewart et al.   Nature Communications

Extremely thermoactive archaeal endoglucanase from a shallow marine hydrothermal vent from Vulcano Island

(2018) Marcel Suleiman et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Expression, purification and molecular characterization of a novel endoglucanase protein from Bacillus subtilis SB13

(2017) Xuefang Guan et al.   PROTEIN EXPRESSION AND PURIFICATION

A Metagenomics Investigation of Carbohydrate-Active Enzymes along the Gastrointestinal Tract of Saudi Sheep

(2017) Saad Al-Masaudi et al.   Frontiers in Microbiology

Metagenomic and metaproteomic analyses of a corn stover-adapted microbial consortium EMSD5 reveal its taxonomic and enzymatic basis for degrading lignocellulose

(2016) Ning Zhu et al.   Biotechnology for Biofuels

Comparative analysis of the secretomes of Schizophyllum commune and other wood-decay basidiomycetes during solid-state fermentation reveals its unique lignocellulose-degrading enzyme system

(2016) Ning Zhu et al.   Biotechnology for Biofuels

Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees

(2016) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Functional diversity of family 3 β-glucosidases from thermophilic cellulolytic fungus Humicola insolens Y1

(2016) Wei Xia et al.   Scientific Reports

Endogenous cellulolytic enzyme systems in the longhorn beetleMesosa myops(Insecta: Coleoptera) studied by transcriptomic analysis

(2015) Jie Liu et al.   ACTA BIOCHIMICA ET BIOPHYSICA SINICA

Bioengineering for utilisation and bioconversion of straw biomass into bio-products

(2015) Seyed Hamidreza Ghaffar et al.   INDUSTRIAL CROPS AND PRODUCTS

Rumen Cellulosomics: Divergent Fiber-Degrading Strategies Revealed by Comparative Genome-Wide Analysis of Six Ruminococcal Strains

(2014) Bareket Dassa et al.   PLoS One

Function-Based Classification of Carbohydrate-Active Enzymes by Recognition of Short, Conserved Peptide Motifs

(2013) Peter Kamp Busk et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cloning and functional characterization of endo-β-1,4-glucanase gene from metagenomic library of vermicompost

(2013) Muhammad Yasir et al.   JOURNAL OF MICROBIOLOGY

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

The abundance and variety of carbohydrate-active enzymes in the human gut microbiota

(2013) Abdessamad El Kaoutari et al.   NATURE REVIEWS MICROBIOLOGY

Discovery of Glycoside Hydrolase Enzymes in an Avicel-Adapted Forest Soil Fungal Community by a Metatranscriptomic Approach

(2013) Kazuto Takasaki et al.   PLoS One

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Identification of Sheep Ovary Genes Potentially Associated with Off-season Reproduction

(2012) Lei Chen et al.   Journal of Genetics and Genomics

Functional characterization of cellulases identified from the cow rumen fungus Neocallimastix patriciarum W5 by transcriptomic and secretomic analyses

(2011) Tzi-Yuan Wang et al.   Biotechnology for Biofuels

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Cloning and characterization of a novel cold-active endoglucanase establishing a new subfamily of glycosyl hydrolase family 5 from a psychrophilic deep-sea bacterium

(2011) Jinying Yang et al.   FEMS MICROBIOLOGY LETTERS

Integrative analysis of environmental sequences using MEGAN4

(2011) D. H. Huson et al.   GENOME RESEARCH

HMMER web server: interactive sequence similarity searching

(2011) R. D. Finn et al.   NUCLEIC ACIDS RESEARCH

Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen

(2011) M. Hess et al.   SCIENCE

Identification and characterization of a multidomain hyperthermophilic cellulase from an archaeal enrichment

(2011) Joel E. Graham et al.   Nature Communications

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Cellulolytic Systems in Insects

(2009) Hirofumi Watanabe et al.   Annual Review of Entomology

Substrate specificity of family 5, 6, 7, 9, 12, and 45 endoglucanases

(2009) E. Vlasenko et al.   BIORESOURCE TECHNOLOGY

From cellulosomes to cellulosomics

(2008) Edward A. Bayer et al.   CHEMICAL RECORD

Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)

(2008) Diego Martinez et al.   NATURE BIOTECHNOLOGY

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

(2008) B. L. Cantarel et al.   NUCLEIC ACIDS RESEARCH