4.8 Article

Hierarchic Interfacial Nanocube Assembly for Sensitive, Selective, and Quantitative DNA Detection with Surface-Enhanced Raman Scattering

期刊

ANALYTICAL CHEMISTRY
卷 91, 期 16, 页码 10467-10476

出版社

AMER CHEMICAL SOC
DOI: 10.1021/acs.analchem.9b01272

关键词

-

资金

  1. BioNano Health-Guard Research Center - Ministry of Science and ICT (MSIT) of Korea as Global Frontier Project [H-GUARD_2013M3A6B2078947]
  2. Basic Science Research Program through the National Research Foundation of Korea (NRF) - Ministry of Science and ICT [NRF-2016R1A2A1A05005430]
  3. National Research Foundation of Korea (NRF) - Korea government (MSIT) [NRF-2017R1ASA1015365]

向作者/读者索取更多资源

Surface-enhanced Raman scattering (SERS)-based sensing is promising in that it has potential to allow for highly sensitive, selective, and multiplexed detection and imaging. However, the controlled assembly and gap formation between plasmonic particles for generating strong SERS signals in a quantitative manner is highly challenging, especially on biodetection platforms, and particle-to-particle variation in the signal enhancement can vary by several orders of magnitude in a single batch, largely limiting the reliable use of SERS for practical sensing applications. Here, a hierarchic-nanocube-assembly based SERS (H-Cube-SERS) bioassay to controllably amplify the electromagnetic field between gold nanocubes (AuNCs) is developed. Based on this strategy, H-Cube-SERS assay allows for detecting target DNA with a wide dynamic range from 100 aM to 10 pM concentrations in a stable and reproducible manner. It is also found that the uniformly formed AuNCs with flat surfaces are much more suitable for highly sensitive, reliable, and quantitative biodetection assays due to faster DNA binding kinetics, sharper DNA melting transition, wider hot spot regions, and less dependence on light polarization direction than spherical Au nanoparticles with curved interfaces. This work paves the pathways to the quantitative and sensitive biodetection on a SERS platform and can be extended to other particle assembly systems.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.8
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Chemistry, Physical

Enormous Enhancement in Single-Particle Surface-Enhanced Raman Scattering with Size-Controllable Au Double Nanorings

Jieun Shin, Sungwoo Lee, Sungjae Yoo, Insub Jung, Soohyun Lee, Jeongwon Kim, Jiwoong Son, Ji-Eun Kim, Jae-Myoung Kim, Jwa-Min Nam, Sungho Park

Summary: To enhance the near-field focusing around nanoscale metal particles, we designed large-sized gold double nanorings with nanoscale gaps between them. These gaps resemble hot halos where single-particle surface-enhanced Raman scattering occurs. The synthesis of these gold nanohalos was achieved using a novel strategy based on hexagonal gold nanoplates as templates. The resulting nanohalos exhibited near-field focusing, confirmed by both experimental measurements and theoretical simulation. The study also revealed a correlation between the distances of intra-nanogaps and particle sizes of gold nanohalos on single-particle surface-enhanced Raman scattering, with high enhancement factors and reproducibility.

CHEMISTRY OF MATERIALS (2022)

Article Chemistry, Multidisciplinary

Ring-in-a-Triangle Nanoframes: Integrating with Intra- and Interhotspots for Highly Amplified Near-Field Focusing

Sungeun Go, Sungjae Yoo, Jiwoong Son, Soohyun Lee, Jaewon Lee, Sungwoo Lee, Jeongwon Kim, Minsun Park, Woocheol Park, Jae-Myoung Kim, Jwa-Min Nam, Sungho Park

Summary: The development of a stepwise synthetic strategy for Au ring-in-a-triangle nanoframes is crucial for highly amplified near-field focusing and successful single-particle surface-enhanced Raman scattering (SERS). The presence of inscribed nanorings plays a significant role in enhancing the lightning rod effect. The evaluation of single-particle SERS and the construction of two-dimensional SERS substrates contribute to the outstanding linearity of the calibration curve and the lowest limit of detection.

NANO LETTERS (2022)

Article Chemistry, Multidisciplinary

Multiplex SNP Genotyping Using SWITCH: Sequence-Specific Nanoparticle with Interpretative Toehold-Mediated Sequence Decoding in Hydrogel

Woongsun Choi, Eunhye Park, Seojin Bae, Kyung-Hak Choi, Sangeun Han, Kuk-Hui Son, Do Young Lee, Il-Joo Cho, Hyejeong Seong, Kyo Seon Hwang, Jwa-Min Nam, Jungkyu Choi, Hyojin Lee, Nakwon Choi

Summary: This study presents a novel technology, SWITCH, for PCR-free, multiplex SNP genotyping with a single reporting fluorophore. The technology successfully demonstrated 4-plex detection of warfarin-associated SNP targets with excellent specificity.
Article Chemistry, Multidisciplinary

Heterogeneous Component Au (Outer)-Pt (Middle)-Au (Inner) Nanorings: Synthesis and Vibrational Characterization on Middle Pt Nanorings with Surface-Enhanced Raman Scattering

Soohyun Lee, Insub Jung, Jiwoong Son, Sungwoo Lee, Minsun Park, Ji-Eun Kim, Woocheol Park, Jaewon Lee, Jwa-Min Nam, Sungho Park

Summary: We report a synthetic approach for the fabrication of intertwined heterometallic nanorings, in which three differently sized metal rings overlap concentrically. The synthetic method allows control over the core ring component and tunable gap distance. The narrow circular nanogaps between inner and outer Au rings enhance electromagnetic near-field, enabling surface-enhanced Raman scattering at the single-particle level. In particular, when the middle ring component is Pt, the in situ SERS measurement of electrochemical reactions on Pt domains can be monitored due to the near-field focusing assisted by plasmonic Au nanorings.

ACS NANO (2022)

Editorial Material Chemistry, Multidisciplinary

Announcing the Winner of the Inaugural Nano Letters Seed Grant Program, Europe and Australia Region

Nanshu Lu, Jwa-Min Nam

NANO LETTERS (2022)

Review Chemistry, Multidisciplinary

Conjugation strategies of DNA to gold nanoparticles

Da Yeon Choi, Suhyun Kim, Jeong-Wook Oh, Jwa-Min Nam

Summary: DNA-modified gold nanoparticles play important roles in constructing three-dimensional assembly structures and biomedical applications. As ligand molecules, DNA strands can facilitate the building block function of gold nanoparticles due to their inherent bonding nature. Additionally, the negative electrostatic character of DNA backbones ensures the stability and robustness of colloidal gold nanoparticles in various aqueous environments. Therefore, DNA conjugation to gold nanoparticle surfaces is a crucial step for stabilizing, controlling, and utilizing DNA-modified gold nanoparticles, and the appropriate conjugation strategy should be chosen and implemented based on specific applications. This review discusses various DNA conjugation strategies to gold nanoparticles with different functional groups, as well as the importance of DNA grafting density and directional grafting strategies in constructing three-dimensional nanoparticle assembly structures through DNA hybridization.

BULLETIN OF THE KOREAN CHEMICAL SOCIETY (2022)

Article Chemistry, Multidisciplinary

Plasmonic Dual-Gap Nanodumbbells for Label-Free On-Particle Raman DNA Assays

Jae-Myoung Kim, Jiyeon Kim, Kyungin Choi, Jwa-Min Nam

Summary: Metal nanostructures with a tunable plasmonic gap are synthesized for various applications. A plasmonic nanostructure with tunable dual nanogaps, called Au dual-gap nanodumbbells (AuDGNs), is designed and synthesized with high yield. These AuDGNs enable label-free on-particle SERS detection assays and show high specificity and sensitivity without the need for Raman dyes.

ADVANCED MATERIALS (2023)

Review Chemistry, Multidisciplinary

Plasmonic quenching and enhancement: metal-quantum dot nanohybrids for fluorescence biosensing

Niko Hildebrandt, Mihye Lim, Namjun Kim, Da Yeon Choi, Jwa-Min Nam

Summary: Plasmonic metal nanoparticles and semiconductor quantum dots are widely used nanomaterials in optical biosensing and bioimaging. While their combination for fluorescence quenching via nanosurface energy transfer or Forster resonance energy transfer is common, metal-QD nanohybrids for plasmon-enhanced fluorescence have been less prevalent. This article discusses the challenges in optimizing distances, orientations, and spectral overlap for maximum plasmon-enhanced fluorescence and reviews the different nanomaterials, their combinations, and applications in advanced optical biosensing and bioimaging.

CHEMICAL COMMUNICATIONS (2023)

Article Chemistry, Multidisciplinary

Toward Quantitative Surface-Enhanced Raman Scattering with Plasmonic Nanoparticles: Multiscale View on Heterogeneities in Particle Morphology, Surface Modification, Interface, and Analytical Protocols

Jiwoong Son, Gyeong-Hwan Kim, Yeonhee Lee, Chungyeon Lee, Seungsang Cha, Jwa-Min Nam

Summary: This article discusses the principles and applications of surface-enhanced Raman scattering (SERS) and focuses on the design principles and key issues of plasmonic nanoparticle substrates. The article highlights the limited controllability and uniformity of plasmonic nanoparticles, as well as the challenges in molecular modification chemistry and analytical protocols for SERS. The article also introduces recent advances in the uniform and controllable synthesis of plasmonic nanoparticle systems and the emerging machine learning-based analysis for quantitative SERS. Overall, this perspective provides insights into the challenges and potential solutions in utilizing plasmonic nanoparticle systems for reliable quantitative measurement of molecules.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2022)

Article Chemistry, Multidisciplinary

Plasmonic Cyclic Au Nanosphere Hexamers

Jeongwon Kim, Sungwoo Lee, Jiwoong Son, Jieun Kim, Hajir Hilal, Minsun Park, Insub Jung, Jwa-Min Nam, Sungho Park

Summary: Rational design of plasmonic colloidal assemblies via bottom-up synthesis is challenging but can demonstrate unprecedented optical properties that are strongly related to the shape and spatial arrangement of the assembly. In this study, plasmonic cyclic Au nanosphere hexamers (PCHs) were successfully synthesized and showed excellent performance in single-particle surface-enhanced Raman scattering signals.
Article Chemistry, Multidisciplinary

Plasmonic Cross-Linking Colorimetric PCR for Simple and Sensitive Nucleic Acid Detection

Kunlun Jiang, Jingrui Wu, Ji-Eun Kim, Sujin An, Jwa-Min Nam, Yung-Kang Peng, Jung-Hoon Lee

Summary: A novel plasmonic cross-linking colorimetric PCR (PPTccPCR) assay is proposed by integrating plasmonic magnetic nanoparticle (PMN)-based PPT-PCR with gold nanoparticle (AuNP) cross-linking colorimetry. This method enables visual detection of target DNA with concentrations as low as 5 copies/μL within 40 minutes. The simple and sensitive strategy does not require expensive instrumentation and has high potential for clinical diagnostic applications.

NANO LETTERS (2023)

Article Nanoscience & Nanotechnology

DNA origami-designed 3D phononic crystals

Sung Hun Park, Haedong Park, Jwa-Min Nam, Yonggang Ke, Tim Liedl, Ye Tian, Seungwoo Lee

Summary: Moulding the flow of phononic waves in 3D space is critical for controlling sound and thermal properties. DNA origami-designed 3D crystals can serve as hypersonic 3D phononic crystals (PnCs) with the widest complete phononic bandgap (PnBG). This provides a blueprint for the design and fabrication of mesoscale 3D PnCs with optimal lattice geometry.

NANOPHOTONICS (2023)

Review Chemistry, Physical

Nanotechnologies for the Diagnosis and Treatment of SARS-CoV-2 and Its Variants

Eunhye Park, So Young Choi, Jieun Kim, Niko Hildebrandt, Jin Seok Lee, Jwa-Min Nam

Summary: This article introduces the important role of nanotechnology in the diagnosis and treatment of COVID-19. For SARS-CoV-2 and its variants, nanomaterial-based diagnostic and therapeutic strategies, including nucleic acid- and antigen-targeting diagnostic methods and viral activity suppression approaches, are discussed.

SMALL METHODS (2023)

Review Chemistry, Multidisciplinary

Trends and perspectives in bio- and eco-friendly sustainable nanomaterial delivery systems through biological barriers

Seongchan Kim, Taegon Oh, Hyojin Lee, Jwa-Min Nam

Summary: This article reviews the various types of nanoparticles used as delivery vehicles in clinical therapeutic applications, discussing their advantageous properties and functions, as well as the issues and limitations. The strategies to overcome biological barriers and harsh physiological conditions are summarized, and green synthesis methods and their environmental impacts are introduced and discussed. The article also provides perspectives on the biocompatibility, toxicity and environmental consequences of nanoparticles developed for biomedical applications.

MATERIALS CHEMISTRY FRONTIERS (2022)

Review Chemistry, Multidisciplinary

Electrochromic response and control of plasmonic metal nanoparticles

Yoonhee Kim, Seungsang Cha, Jae-Ho Kim, Jeong-Wook Oh, Jwa-Min Nam

Summary: The mechanisms underlying the electrochromism of plasmonic metal nanoparticles can be categorized into four types based on the origin of the LSPR shift: capacitive charging model, faradaic reactions, non-faradaic reactions, and electrochemically active functional molecule-mediated mechanism. Recent efforts have focused on synchronizing simulation with experimental results and overcoming the inherently small LSPR change of plasmonic metal nanoparticles.

NANOSCALE (2021)

暂无数据