Regulation of arginine biosynthesis, catabolism and transport in Escherichia coli

Learning the ABCs one at a time: structure and mechanism of ABC transporters

(2019) Robert C. Ford et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Allosteric Feedback Inhibition Enables Robust Amino Acid Biosynthesis in E. coli by Enforcing Enzyme Overabundance

(2019) Timur Sander et al.   Cell Systems

Differential protein-DNA contacts for activation and repression by ArgP, a LysR-type (LTTR) transcriptional regulator in Escherichia coli

(2018) Phu Nguyen Le Minh et al.   MICROBIOLOGICAL RESEARCH

Regulation of carbamoylphosphate synthesis in Escherichia coli: an amazing metabolite at the crossroad of arginine and pyrimidine biosynthesis

(2018) Daniel Charlier et al.   AMINO ACIDS

Effects of polyamines on protein synthesis and growth ofEscherichia coli

(2018) Kazuei Igarashi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Polyamine function in archaea and bacteria

(2018) Anthony J. Michael   JOURNAL OF BIOLOGICAL CHEMISTRY

The transcriptional regulator LysG (Rv1985c) of Mycobacterium tuberculosis activates lysE (Rv1986) in a lysine-dependent manner

(2017) Marie Schneefeld et al.   PLoS One

The trigger enzyme PepA (aminopeptidase A) ofEscherichia coli, a transcriptional repressor that generates positive supercoiling

(2016) Phu Nguyen Le Minh et al.   FEBS LETTERS

The Topology of the l-Arginine Exporter ArgO Conforms to an N in -C out Configuration in Escherichia coli: Requirement for the Cytoplasmic N-Terminal Domain, Functional Helical Interactions, and an Aspartate Pair for ArgO Function

(2016) Amit Pathania et al.   JOURNAL OF BACTERIOLOGY

Insights into the molecular basis for substrate binding and specificity of the wild-type L-arginine/agmatine antiporter AdiC

(2016) Hüseyin Ilgü et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Efflux systems in bacteria and their metabolic engineering applications

(2015) Christopher M. Jones et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Distinct Paths for Basic Amino Acid Export in Escherichia coli: YbjE (LysO) Mediates Export of l-Lysine

(2015) Amit Pathania et al.   JOURNAL OF BACTERIOLOGY

Remaining Mysteries of Molecular Biology: The Role of Polyamines in the Cell

(2015) Leonor Miller-Fleming et al.   JOURNAL OF MOLECULAR BIOLOGY

The architecture of ArgR-DNA complexes at the genome-scale in Escherichia coli

(2015) Suhyung Cho et al.   NUCLEIC ACIDS RESEARCH

Evolution of proline biosynthesis: enzymology, bioinformatics, genetics, and transcriptional regulation

(2014) Yosef Fichman et al.   BIOLOGICAL REVIEWS

Integration Host Factor is Required for the Induction of Acid Resistance in Escherichia coli

(2014) Hongkai Bi et al.   CURRENT MICROBIOLOGY

Intracellular Concentrations of 65 Species of Transcription Factors with Known Regulatory Functions in Escherichia coli

(2014) A. Ishihama et al.   JOURNAL OF BACTERIOLOGY

Structural diversity of ABC transporters

(2014) Josy ter Beek et al.   JOURNAL OF GENERAL PHYSIOLOGY

The redundant aminotransferases in lysine and arginine synthesis and the extent of aminotransferase redundancy inEscherichia coli

(2014) Piyush Behari Lal et al.   MOLECULAR MICROBIOLOGY

Molecular mechanism of pH-dependent substrate transport by an arginine-agmatine antiporter

(2014) S. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanisms of Acid Resistance inEscherichia coli

(2013) Usheer Kanjee et al.   Annual Review of Microbiology

Conformational changes of the bacterial type I ATP-binding cassette importer HisQMP2 at distinct steps of the catalytic cycle

(2013) Johanna Heuveling et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Dissecting specific and global transcriptional regulation of bacterial gene expression

(2013) L. Gerosa et al.   Molecular Systems Biology

Substrate selectivity in arginine-dependent acid resistance in enteric bacteria

(2013) M.-F. Tsai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcriptional Cross-Regulation between Gram-Negative and Gram-Positive Bacteria, Demonstrated Using ArgP-argO of Escherichia coli and LysG-lysE of Corynebacterium glutamicum

(2012) C. N. Marbaniang et al.   JOURNAL OF BACTERIOLOGY

Structure and Mechanisms of Escherichia coli Aspartate Transcarbamoylase

(2011) William N. Lipscomb et al.   ACCOUNTS OF CHEMICAL RESEARCH

Structure and function of polyamine-amino acid antiporters CadB and PotE in Escherichia coli

(2011) Hideyuki Tomitori et al.   AMINO ACIDS

Role of ArgP (IciA) in Lysine-Mediated Repression in Escherichia coli

(2011) C. N. Marbaniang et al.   JOURNAL OF BACTERIOLOGY

Identification of ArgP and Lrp as Transcriptional Regulators of lysP, the Gene Encoding the Specific Lysine Permease of Escherichia coli

(2011) J. Ruiz et al.   JOURNAL OF BACTERIOLOGY

Deciphering the transcriptional regulatory logic of amino acid metabolism

(2011) Byung-Kwan Cho et al.   Nature Chemical Biology

A conserved RpoS-dependent small RNA controls the synthesis of major porin OmpD

(2011) Kathrin S. Fröhlich et al.   NUCLEIC ACIDS RESEARCH

Molecular basis of substrate-induced permeation by an amino acid antiporter

(2011) L. Kowalczyk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Acid stress response in enteropathogenic gammaproteobacteria: an aptitude for survivalThis paper is one of a selection of papers published in this special issue entitled “Canadian Society of Biochemistry, Molecular & Cellular Biology 52nd Annual Meeting — Protein Folding: Principles and Diseases” and has undergone the Journal's usual peer review process.

(2010) Boyu Zhao et al.   Biochemistry and Cell Biology

Mechanism of substrate recognition and transport by an amino acid antiporter

(2010) Xiang Gao et al.   NATURE

Symmetric Allosteric Mechanism of Hexameric Escherichia coli Arginine Repressor Exploits Competition between L-Arginine Ligands and Resident Arginine Residues

(2010) Rebecca Strawn et al.   PLoS Computational Biology

Reengineering of a Corynebacterium glutamicum L-Arginine and L-Citrulline Producer

(2009) M. Ikeda et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Crystal Structure of the Acid-Induced Arginine Decarboxylase fromEscherichia coli: Reversible Decamer Assembly Controls Enzyme Activity

(2009) Juni Andréll et al.   BIOCHEMISTRY

Cells need safety valves

(2009) Antoine Danchin   BIOESSAYS

The Structure of the Arginine Repressor from Mycobacterium tuberculosis Bound with its DNA Operator and Co-repressor, L-Arginine

(2009) Leonid T. Cherney et al.   JOURNAL OF MOLECULAR BIOLOGY

Crystal Structure of ArgP from Mycobacterium tuberculosis Confirms Two Distinct Conformations of Full-length LysR Transcriptional Regulators and Reveals Its Function in DNA Binding and Transcriptional Regulation

(2009) Xiaohong Zhou et al.   JOURNAL OF MOLECULAR BIOLOGY

Competitive activation of the Escherichia coli argO gene coding for an arginine exporter by the transcriptional regulators Lrp and ArgP

(2009) Eveline Peeters et al.   MOLECULAR MICROBIOLOGY

Structure of a prokaryotic virtual proton pump at 3.2 Å resolution

(2009) Yiling Fang et al.   NATURE

Insights into the architecture and stoichiometry of Escherichia coli PepA*DNA complexes involved in transcriptional control and site-specific DNA recombination by atomic force microscopy

(2009) P. N. L. Minh et al.   NUCLEIC ACIDS RESEARCH

Structure and Mechanism of an Amino Acid Antiporter

(2009) X. Gao et al.   SCIENCE

Ins and Outs of Major Facilitator Superfamily Antiporters

(2008) Christopher J. Law et al.   Annual Review of Microbiology

Transcription Regulation by Feast/Famine Regulatory Proteins, FFRPs, in Archaea and Eubacteria

(2008) Tsuyoshi Kawashima et al.   BIOLOGICAL & PHARMACEUTICAL BULLETIN

The ArgP Protein Stimulates the Klebsiella pneumoniae gdhA Promoter in a Lysine-Sensitive Manner

(2008) T. J. Goss   JOURNAL OF BACTERIOLOGY

Lysine Represses Transcription of the Escherichia coli dapB Gene by Preventing Its Activation by the ArgP Activator

(2008) J. Bouvier et al.   JOURNAL OF BACTERIOLOGY

Structure and Function of the Arginine Repressor-Operator Complex from Bacillus subtilis

(2008) James A. Garnett et al.   JOURNAL OF MOLECULAR BIOLOGY

Crystal Structure of the Arginine Repressor Protein in Complex with the DNA Operator from Mycobacterium tuberculosis

(2008) Leonid T. Cherney et al.   JOURNAL OF MOLECULAR BIOLOGY

Structure, Function, and Evolution of Bacterial ATP-Binding Cassette Systems

(2008) A. L. Davidson et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Structure and function of the LysR-type transcriptional regulator (LTTR) family proteins

(2008) S. E. Maddocks et al.   MICROBIOLOGY-SGM

Genome-scale reconstruction of the Lrp regulatory network in Escherichia coli

(2008) B.-K. Cho et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA