Fast and accurate relatedness estimation from high-throughput sequencing data in the presence of inbreeding

Fast and accurate relatedness estimation from high-throughput sequencing data in the presence of inbreeding

(2019) Kristian Hanghøj et al.   GigaScience

Estimating genetic kin relationships in prehistoric populations

(2018) Jose Manuel Monroy Kuhn et al.   PLoS One

Estimating Seven Coefficients of Pairwise Relatedness Using Population-Genomic Data

(2017) Matthew S. Ackerman et al.   GENETICS

Composite likelihood method for inferring local pedigrees

(2017) Amy Ko et al.   PLoS Genetics

Estimating Seven Coefficients of Pairwise Relatedness Using Population-Genomic Data

(2017) Matthew S. Ackerman et al.   GENETICS

On the use of dense SNP marker data for the identification of distant relative pairs

(2016) M. Sun et al.   THEORETICAL POPULATION BIOLOGY

ANGSD: Analysis of Next Generation Sequencing Data

(2014) Thorfinn Sand Korneliussen et al.   BMC BIOINFORMATICS

Measuring Relatedness between Inbred Individuals

(2014) P. W. Hedrick et al.   JOURNAL OF HEREDITY

Estimating inbreeding coefficients from NGS data: Impact on genotype calling and allele frequency estimation

(2013) Filipe G. Vieira et al.   GENOME RESEARCH

Non-identifiability of identity coefficients at biallelic loci

(2013) Miklós Csűrös   THEORETICAL POPULATION BIOLOGY

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

Robust relationship inference in genome-wide association studies

(2010) Ani Manichaikul et al.   BIOINFORMATICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

coancestry: a program for simulating, estimating and analysing relatedness and inbreeding coefficients

(2010) JINLIANG WANG   Molecular Ecology Resources

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Simple and Globally Convergent Methods for Accelerating the Convergence of Any EM Algorithm

(2008) RAVI VARADHAN et al.   SCANDINAVIAN JOURNAL OF STATISTICS