Article
Chemistry, Multidisciplinary
Yao Qian, Xiangyu Guo, Yunfang Wang, Zheng Ouyang, Xiaoxiao Ma
Summary: A mobility-modulated sequential dissociation (MMSD) strategy was developed for mass spectrometry imaging, enabling spatial lipidomics capable of multiplexed MS/MS imaging of 24 structurally distinct lipids. The method revealed a potential biomarker in a human hepatocellular carcinoma tissue.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
(2023)
Article
Agriculture, Multidisciplinary
Xianlin Han, Hongping Ye
Summary: Although triglycerides play important roles in cellular growth, metabolism, and function, accurately identifying their molecular species and quantities remains a challenge.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
(2021)
Article
Biotechnology & Applied Microbiology
Joao P. Monteiro, Tania Melo, Jorunn Skjermo, Silje Forbord, Ole J. Broch, Pedro Domingues, Ricardo Calado, M. Rosario Domingues
Summary: Macroalgae aquaculture, especially kelp farming, is flourishing across different production sites in Europe. The elemental and biochemical composition of Saccharina latissima is influenced significantly by the time of harvesting, with less impact from the proximity to nutrient sources like fish farm sea cages. Harvested kelp biomass in April showed differences in composition compared to those in May and June, mainly in terms of lower C, H, carbohydrates, and higher ash contents. The lipid profile analysis also revealed changes in fatty acids and lipid signatures based on the harvesting periods.
ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS
(2021)
Article
Biochemistry & Molecular Biology
Cristina Manis, Antonio Murgia, Alessia Manca, Antonella Pantaleo, Giacomo Cao, Pierluigi Caboni
Summary: Our study using a hyphenated ion mobility mass spectrometric platform for lipid profiling of human erythrocytes expands the understanding of cellular processes and stress due to microgravity. We identified complex lipids associated with microgravity conditions, such as oxidized phosphocholines, phosphocholines bearing arachidonic in their moiety, as well as sphingomyelins and hexosyl ceramides. These findings provide insights into molecular alterations and erythrocyte lipidomics signatures associated with microgravity conditions.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Green & Sustainable Science & Technology
Matthew C. C. Taylor, Rodney D. D. Roberts, Matthew R. R. Miller
Summary: The Greenshell mussel is a significant aquaculture species in New Zealand, known for its expensive bioactive lipid extracts. This study characterizes the lipidome of the Greenshell mussel for the first time, providing new insights into its nutrition, biology, physiology, and epidemiology. The findings can be used to enhance breeding programs and optimize nutrition and extract production.
Article
Biochemical Research Methods
Lauren M. Bishop, Oliver Fiehn
Summary: Large-scale lipidomic analyses have been limited by the cost and accessibility of traditional venipuncture sampling. Microsampling techniques offer a less-invasive and more accessible alternative. From a single drop of blood, plasma separation cards (PSC) deliver two volumetric dried plasma samples which are studied here for profiling endogenous blood lipids.
ANALYTICAL AND BIOANALYTICAL CHEMISTRY
(2023)
Article
Agriculture, Dairy & Animal Science
Andrea Grana-Baumgartner, Venkata S. R. Dukkipati, Patrick J. Biggs, Paul R. Kenyon, Hugh T. Blair, Nicolas Lopez-Villalobos, Alastair B. Ross
Summary: This study evaluated the impact of short-term cold exposure on new-born lamb brown adipose tissue and plasma lipid composition. The results showed that cold exposure induced significant changes in the lipidome composition, potentially enhancing lipid metabolism and survival during cold adaptation. The study suggests that identifying potential biomarkers for brown adipose tissue activity could improve survival in new-born lambs.
Article
Biotechnology & Applied Microbiology
Diana Lopes, Tania Melo, Felisa Rey, Elisabete Costa, Ana S. P. Moreira, Maria H. Abreu, Pedro Domingues, Ana Lillebo, Ricardo Calado, M. Rosario Domingues
Summary: The valorization of seaweeds has gained attention for their unique chemical characteristics, particularly in the differentiation between Chlorophyta, Rhodophyta, and Ochrophyta. This study analyzed polar lipidomes of six seaweeds to identify species-specific lipid signatures, with a small group of shared lipid species among all seaweed species. Understanding the specific lipidome of seaweeds can lead to new strategies for chemical tuning during farming to improve the yield of bioactive compounds for sustainable growth in a blue bioeconomy.
ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS
(2021)
Review
Biochemical Research Methods
Sven Heiles
Summary: Metabolomics and lipidomics are driving forces in the omics era, with tandem mass spectrometry methods playing a crucial role in characterizing the structural details of metabolites and lipids. Recent advancements in alternative tandem MS methodologies aim to provide full structural characterization of these compounds. The review critically examines the principles, capabilities, drawbacks, and initial applications of these advanced tandem mass spectrometry strategies in the fields of metabolomics and lipidomics.
ANALYTICAL AND BIOANALYTICAL CHEMISTRY
(2021)
Article
Food Science & Technology
Sha Yan, Xuan Wang, Minghui Sun, Wenqian Wang, Liming Wu, Xiaofeng Xue
Summary: Royal jelly is a popular nutraceutical with unique lipid composition, including phospholipids and trans-10-hydroxy-2-decenoic acid. This study found that the lipid composition of royal jelly is influenced by its botanical origin.
LWT-FOOD SCIENCE AND TECHNOLOGY
(2022)
Article
Biochemistry & Molecular Biology
Anna Tkachev, Elena Stekolshchikova, Nickolay Anikanov, Svetlana Zozulya, Aleksandra Barkhatova, Tatiana Klyushnik, Daria Petrova
Summary: Changes in certain lipid levels in the blood plasma of schizophrenia patients may be associated with the extent of symptom improvement, with these lipid species characterized by a relatively low number of carbons in their fatty acid residues and relatively low abundance compared to principal triglyceride species in blood plasma.
Article
Environmental Sciences
Sheng-Han Lee, Wei-Chen Tseng, Zhi-Yi Du, Wan-Yu Lin, Mei-Huei Chen, Ching-Chun Lin, Guang-Wen Lien, Hao-Jan Liang, Hui-Ju Wen, Yue-Leon Guo, Pau-Chung Chen, Ching-Yu Lin
Summary: This study evaluated the impact of PFASs exposure on lipid changes in children, finding that children exposed to different levels of specific PFASs exhibited different lipid patterns, potentially related to hepatic lipid metabolism, metabolic disorders, and PFASs-membrane interactions.
ENVIRONMENTAL POLLUTION
(2021)
Article
Pharmacology & Pharmacy
Jinghui Zhang, Yanjun Hong, Peisi Xie, Yang Chen, Lilong Jiang, Zhiyi Yang, Guodong Cao, Zhongjian Chen, Xuesong Liu, Yong Chen, Yongjiang Wu, Zongwei Cai
Summary: The combination treatment with Bufalin and cinobufagin showed superior anticancer efficacy by modulating sphingolipid metabolism and glycerophospholipid metabolism, leading to mitochondria-driven apoptosis and disruption of biomembranes in tumor cells. Disturbed lipid markers were mainly located in non-necrotic tumor areas, essential for solid tumor framework formation.
FRONTIERS IN PHARMACOLOGY
(2021)
Article
Chemistry, Applied
Ka-Yi Man, Chi-On Chan, Hok-Him Tang, Nai-ping Dong, Francesco Capozzi, Ka-Hing Wong, Kevin Wing Hin Kwok, Hing Man Chan, Daniel Kam-Wah Mok
Summary: This study utilized mass spectrometry-based metabolomics to analyze the metabolite profiles of beef samples in Hong Kong, successfully distinguishing beef samples from different countries and feeding regimes. Metabolomics proves to be an efficient strategy for tracing and authenticating beef products, ensuring their quality and protecting consumer rights.
Review
Biochemistry & Molecular Biology
Martina Zandl-Lang, Barbara Plecko, Harald Koefeler
Summary: Although Next-Generation Sequencing (NGS) has helped identify disease-associated mutations, the diagnostic rate of rare diseases is still low. Improving the diagnostic rate and reducing time to diagnosis in children with unclear diseases is crucial. Analyzing lipids in biological samples provides important insights into their functional role in health and disease.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Fisheries
Philip Graham, Gianni Brundu, Maria Scolamacchia, Angelica Gighon, Piero Addis, Yuri Artioli, Trevor Telfer, Stefano Carboni
Article
Multidisciplinary Sciences
Vincenzo Alessandro Laudicella, Christine Beveridge, Stefano Carboni, Sofia C. Franco, Mary K. Doherty, Nina Long, Elaine Mitchell, Michele S. Stanley, Phillip D. Whitfield, Adam D. Hughes
Article
Oceanography
Philip Graham, Lynne Falconer, Trevor Telfer, Paolo Mossone, Iolanda Viale, Stefano Carboni
OCEAN & COASTAL MANAGEMENT
(2020)
Article
Developmental Biology
Susanne Vogeler, Stefano Carboni, Xiaoxu Li, Jacqueline H. Ireland, Penny Miller-Ezzy, Alyssa Joyce
Summary: The study explores the NMDA receptor pathway as a new regulator of bivalve metamorphosis, inducing metamorphosis in Pacific oysters through exposure to specific drugs. Cloning of NMDA receptor subunits and analysis of their expression suggests a potential role in sensory and muscle regulation functions, independent of catecholamine regulation.
DEVELOPMENTAL BIOLOGY
(2021)
Article
Fisheries
J. K. Penhaul Smith, C. Beveridge, V. A. Laudicella, A. D. Hughes, L. McEvoy, J. G. Day
Summary: The study shows that using mixotrophic microalgae feeds can effectively promote the growth and survival of blue mussel larvae, reducing costs and increasing profitability in a larval hatchery.
AQUACULTURE INTERNATIONAL
(2021)
Article
Biotechnology & Applied Microbiology
Susanne Vogeler, Stefano Carboni, Xiaoxu Li, Alyssa Joyce
Summary: This study identified multiple homologues of caspases in bivalves through bioinformatics and phylogenetic analyses, revealing novelty and complexity in the bivalve caspase family. The findings suggest unique roles of caspases in bivalve immune response and common diseases, providing essential new insights for further investigations.
Review
Nutrition & Dietetics
Elham Yaghubi, Stefano Carboni, Rhiannon M. J. Snipe, Christopher S. Shaw, Jackson J. Fyfe, Craig M. Smith, Gunveen Kaur, Sze-Yen Tan, David Lee Hamilton
Summary: The growing population presents challenges in providing sustainable food options and reducing pressures on agricultural land and freshwater resources. Farmed mussels may offer a partial solution to reducing GHGs associated with diets, as they provide sustainable high-quality protein and essential nutrients without putting undue pressure on land or water supplies.
Article
Biotechnology & Applied Microbiology
Ana Corrochano-Fraile, Andrew Davie, Stefano Carboni, Michael Bekaert
Summary: This study fills the gap of genomic resources for molluscs, revealing multiple whole genome duplication events in the Mytilidae family and the class Bivalvia. The calculation of evolution rates in the Mytilinae subfamily provides insights into the evolutionary history, and the reference genome enables the identification of molecular markers for evolutionary and conservation studies. Mytilidae have the potential to be a model shellfish for climate change adaptation and multi-disciplinary studies.
Article
Fisheries
Barbara Loi, Francesca Leggieri, Gemma Gimenez Papiol, Gianfranca Carta, Sebastiano Banni, Stefano Carboni, Dario Vallainc
Summary: Salinity affects the survival and growth rate of juvenile Mugil cephalus. The study found that regardless of freshwater or saltwater rearing, the survival rate of the fish was high and similar. Juveniles reared in saltwater exhibited a higher specific growth rate for body weight. There were similarities in lipid deposition among salinity treatments, but the levels of bioactive metabolite N-acylethanolamines were significantly higher in fish reared in freshwater. These findings suggest that transferring juvenile mullets from saltwater hatchery conditions to freshwater is a viable commercial production strategy.
AQUACULTURE RESEARCH
(2022)
Article
Environmental Sciences
Ana Corrochano-Fraile, Thomas P. Adams, Dmitry Aleynik, Michael Bekaert, Stefano Carboni
Summary: This study investigates the distribution and dispersal of bivalve larvae in Scottish waters using a simulation model, revealing the significant impact of meteorological factors and identifying a connection between different regions of the West coast. These findings have important implications for the management of ecologically and economically important species and the shellfish fisheries amid climate change.
FRONTIERS IN MARINE SCIENCE
(2022)
Article
Fisheries
Maria Scolamacchia, Danilo Concu, Barbara Loi, Anuta Chindris, Michela Deiana, Cheoma Frongia, Stefano Carboni, Dario Vallainc
Summary: Flathead grey mullet has great potential as a low trophic level aquaculture species, but captive rearing is hindered by a lack of established production protocols. The effects of transport time and egg loading density on water quality, egg survival, hatching success, and early larvae performance were examined. The study found that transport time and manipulation of early hatched larvae and blastophore closure significantly affected survival rates and long-term survival. The results suggest that manipulating grey mullet eggs at 28 hours post-fertilization, without water conditioners, can lead to the best hatching rate and early larvae survival.
Article
Fisheries
Simao Zacarias, Daniel Fegan, Siriroj Wangsoontorn, Nitrada Yamuen, Tarinee Limakom, Stefano Carboni, Andrew Davie, Matthijs Metselaar, David C. Little, Andrew P. Shinn
Summary: The study demonstrates that offspring from non-ablated female P. vannamei are more resilient to common pathogens (Vp(AHPND) and WSSV) and may exhibit higher survival rates during a disease outbreak.
Proceedings Paper
Ecology
Philip Graham, Luca Palazzo, Stefano Carboni, Trevor Telfer, Maura Baroli, Giuseppe Andrea de Lucia
PROCEEDINGS OF THE 2ND INTERNATIONAL CONFERENCE ON MICROPLASTIC POLLUTION IN THE MEDITERRANEAN SEA
(2020)