标题
modEnrichr: a suite of gene set enrichment analysis tools for model organisms
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume -, Issue -, Pages -
出版商
Oxford University Press (OUP)
发表日期
2019-04-26
DOI
10.1093/nar/gkz347
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Massive mining of publicly available RNA-seq data from human and mouse
- (2018) Alexander Lachmann et al. Nature Communications
- OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs
- (2018) Evgenia V Kriventseva et al. NUCLEIC ACIDS RESEARCH
- STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
- (2018) Damian Szklarczyk et al. NUCLEIC ACIDS RESEARCH
- FlyBase 2.0: the next generation
- (2018) Jim Thurmond et al. NUCLEIC ACIDS RESEARCH
- The Pfam protein families database in 2019
- (2018) Sara El-Gebali et al. NUCLEIC ACIDS RESEARCH
- InterPro in 2019: improving coverage, classification and access to protein sequence annotations
- (2018) Alex L Mitchell et al. NUCLEIC ACIDS RESEARCH
- WormBase 2017: molting into a new stage
- (2017) Raymond Y N Lee et al. NUCLEIC ACIDS RESEARCH
- Near-optimal probabilistic RNA-seq quantification
- (2016) Nicolas L Bray et al. NATURE BIOTECHNOLOGY
- Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
- (2016) Maxim V. Kuleshov et al. NUCLEIC ACIDS RESEARCH
- g:Profiler—a web server for functional interpretation of gene lists (2016 update)
- (2016) Jüri Reimand et al. NUCLEIC ACIDS RESEARCH
- The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins
- (2016) Andrew D. Rouillard et al. Database-The Journal of Biological Databases and Curation
- The FAIR Guiding Principles for scientific data management and stewardship
- (2016) Mark D. Wilkinson et al. Scientific Data
- Integrating Apache Airavata with Docker, Marathon, and Mesos
- (2015) Pankaj Saha et al. CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE
- Lynx: a knowledge base and an analytical workbench for integrative medicine
- (2015) Dinanath Sulakhe et al. NUCLEIC ACIDS RESEARCH
- Prediction of DNA binding motifs from 3D models of transcription factors; identifying TLX3 regulated genes
- (2014) Mario Pujato et al. NUCLEIC ACIDS RESEARCH
- Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool
- (2013) Edward Y Chen et al. BMC BIOINFORMATICS
- Large-scale gene function analysis with the PANTHER classification system
- (2013) Huaiyu Mi et al. Nature Protocols
- The YeastGenome app: the Saccharomyces Genome Database at your fingertips
- (2013) Edith D. Wong et al. Database-The Journal of Biological Databases and Curation
- LRpath analysis reveals common pathways dysregulated via DNA methylation across cancer types
- (2012) Jung H Kim et al. BMC GENOMICS
- GenomeRNAi: a database for cell-based and in vivo RNAi phenotypes, 2013 update
- (2012) Esther E. Schmidt et al. NUCLEIC ACIDS RESEARCH
- ZFIN, the Zebrafish Model Organism Database: increased support for mutants and transgenics
- (2012) Douglas G. Howe et al. NUCLEIC ACIDS RESEARCH
- KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases
- (2011) Chen Xie et al. NUCLEIC ACIDS RESEARCH
- DroID 2011: a comprehensive, integrated resource for protein, transcription factor, RNA and gene interactions for Drosophila
- (2010) Thilakam Murali et al. NUCLEIC ACIDS RESEARCH
- The Sequence Read Archive
- (2010) R. Leinonen et al. NUCLEIC ACIDS RESEARCH
- Biopython: freely available Python tools for computational molecular biology and bioinformatics
- (2009) P. J. A. Cock et al. BIOINFORMATICS
- BioMart – biological queries made easy
- (2009) Damian Smedley et al. BMC GENOMICS
- Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
- (2009) Da Wei Huang et al. Nature Protocols
- ToppGene Suite for gene list enrichment analysis and candidate gene prioritization
- (2009) J. Chen et al. NUCLEIC ACIDS RESEARCH
- AmiGO: online access to ontology and annotation data
- (2008) Seth Carbon et al. BIOINFORMATICS
- GOEAST: a web-based software toolkit for Gene Ontology enrichment analysis
- (2008) Qi Zheng et al. NUCLEIC ACIDS RESEARCH
- WikiPathways: Pathway Editing for the People
- (2008) Alexander R Pico et al. PLOS BIOLOGY
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