A Phylogenetic and Functional Perspective on Volatile Organic Compound Production by Actinobacteria

Healthy scents: microbial volatiles as new frontier in antibiotic research?

(2018) Mariana Avalos et al.   CURRENT OPINION IN MICROBIOLOGY

Volatile Organic Compound Emissions From Soil Following Wetting Events

(2018) Sam Rossabi et al.   Journal of Geophysical Research-Biogeosciences

mVOC 2.0: a database of microbial volatiles

(2017) Marie C Lemfack et al.   NUCLEIC ACIDS RESEARCH

Disease Suppressive Soils: New Insights from the Soil Microbiome

(2017) Daniel Schlatter et al.   PHYTOPATHOLOGY

Effects of discrete bioactive microbial volatiles on plants and fungi

(2017) Birgit Piechulla et al.   PLANT CELL AND ENVIRONMENT

Keystone microbial taxa regulate the invasion of a fungal pathogen in agro-ecosystems

(2017) P. Trivedi et al.   SOIL BIOLOGY & BIOCHEMISTRY

The Ecological Role of Volatile and Soluble Secondary Metabolites Produced by Soil Bacteria

(2017) Olaf Tyc et al.   TRENDS IN MICROBIOLOGY

Streptomyces Exploration: Competition, Volatile Communication and New Bacterial Behaviours

(2017) Stephanie E. Jones et al.   TRENDS IN MICROBIOLOGY

Streptomyces exploration is triggered by fungal interactions and volatile signals

(2017) Stephanie E Jones et al.   eLife

Microbial Volatiles: Small Molecules with an Important Role in Intra- and Inter-Kingdom Interactions

(2017) Kristin Schulz-Bohm et al.   Frontiers in Microbiology

Growthcurver: an R package for obtaining interpretable metrics from microbial growth curves

(2016) Kathleen Sprouffske et al.   BMC BIOINFORMATICS

Impact of soil heat on reassembly of bacterial communities in the rhizosphere microbiome and plant disease suppression

(2016) Menno van der Voort et al.   ECOLOGY LETTERS

Latitude delineates patterns of biogeography in terrestrial Streptomyces

(2016) Mallory J. Choudoir et al.   ENVIRONMENTAL MICROBIOLOGY

Volatile Compounds Emitted by Pseudomonas aeruginosa Stimulate Growth of the Fungal Pathogen Aspergillus fumigatus

(2016) Benoit Briard et al.   mBio

A Latitudinal Diversity Gradient in Terrestrial Bacteria of the Genus Streptomyces

(2016) Cheryl P. Andam et al.   mBio

Volatile affairs in microbial interactions

(2015) Ruth Schmidt et al.   ISME Journal

antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters

(2015) Tilmann Weber et al.   NUCLEIC ACIDS RESEARCH

Diversity and functions of volatile organic compounds produced by Streptomyces from a disease-suppressive soil

(2015) Viviane Cordovez et al.   Frontiers in Microbiology

A roadmap for natural product discovery based on large-scale genomics and metabolomics

(2014) James R Doroghazi et al.   Nature Chemical Biology

Biogenic volatile emissions from the soil

(2014) J. PEÑUELAS et al.   PLANT CELL AND ENVIRONMENT

Diversity and evolution of secondary metabolism in the marine actinomycete genus Salinispora

(2014) N. Ziemert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative genomics of actinomycetes with a focus on natural product biosynthetic genes

(2013) James R Doroghazi et al.   BMC GENOMICS

Identification of Volatile Organic Compounds Produced by Bacteria Using HS-SPME-GC–MS

(2013) Emma Tait et al.   JOURNAL OF CHROMATOGRAPHIC SCIENCE

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

mVOC: a database of microbial volatiles

(2013) Marie Chantal Lemfack et al.   NUCLEIC ACIDS RESEARCH

Interspecific bacterial sensing through airborne signals modulates locomotion and drug resistance

(2013) Kwang-sun Kim et al.   Nature Communications

Molecular analysis of volatile metabolites released specifically by staphylococcus aureus and pseudomonas aeruginosa

(2012) Wojciech Filipiak et al.   BMC MICROBIOLOGY

Variability in the concentrations of volatile metabolites emitted by genotypically different strains of Pseudomonas aeruginosa

(2012) V. Shestivska et al.   JOURNAL OF APPLIED MICROBIOLOGY

Short- and medium-chain fatty acids exhibit antimicrobial activity for oral microorganisms

(2011) Chifu B. Huang et al.   ARCHIVES OF ORAL BIOLOGY

Terpenoids are Widespread in Actinomycetes: A Correlation of Secondary Metabolism and Genome Data

(2011) Christian A. Citron et al.   CHEMBIOCHEM

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Antimicrobial activity of butyrate glycerides toward Salmonella Typhimurium and Clostridium perfringens

(2011) H. Namkung et al.   POULTRY SCIENCE

Quorum-sensing quenching by rhizobacterial volatiles

(2011) Leonid Chernin et al.   Environmental Microbiology Reports

Volatile organic compounds (VOCs) in soils

(2010) Heribert Insam et al.   BIOLOGY AND FERTILITY OF SOILS

Microbial consumption and production of volatile organic compounds at the soil-litter interface

(2009) Kelly S. Ramirez et al.   BIOGEOCHEMISTRY

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Volatile organic compound (VOC) emissions from soil and litter samples

(2008) Jonathan W. Leff et al.   SOIL BIOLOGY & BIOCHEMISTRY

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY