Systems-Level Analysis of Oxygen Exposure in Zymomonas mobilis: Implications for Isoprenoid Production

Enhanced performance of the methylerythritol phosphate pathway by manipulation of redox reactions relevant to IspC, IspG, and IspH

(2017) Jia Zhou et al.   JOURNAL OF BIOTECHNOLOGY

Escherichia colicytochromecperoxidase is a respiratory oxidase that enables the use of hydrogen peroxide as a terminal electron acceptor

(2017) Maryam Khademian et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure and Function of Four Classes of the 4Fe–4S Protein, IspH

(2016) Guodong Rao et al.   BIOCHEMISTRY

2016 update of the PRIDE database and its related tools

(2016) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Zymomonas mobilis as a model system for production of biofuels and biochemicals

(2016) Shihui Yang et al.   Microbial Biotechnology

The Low Energy-Coupling Respiration in Zymomonas mobilis Accelerates Flux in the Entner-Doudoroff Pathway

(2016) Reinis Rutkis et al.   PLoS One

Functional Dynamics Revealed by the Structure of the SufBCD Complex, a Novel ATP-binding Cassette (ABC) Protein That Serves as a Scaffold for Iron-Sulfur Cluster Biogenesis

(2015) Kei Hirabayashi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Natural products as biofuels and bio-based chemicals: fatty acids and isoprenoids

(2015) Harry R. Beller et al.   NATURAL PRODUCT REPORTS

Bypasses in intracellular glucose metabolism in iron-limitedPseudomonas putida

(2015) Samantha S. Sasnow et al.   MicrobiologyOpen

Bioorganometallic Chemistry with IspG and IspH: Structure, Function, and Inhibition of the [Fe4S4] Proteins Involved in Isoprenoid Biosynthesis

(2014) Weixue Wang et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Cytochrome bd oxidase and bacterial tolerance to oxidative and nitrosative stress

(2014) Alessandro Giuffrè et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Coordinate Regulation of the Suf and Isc Fe-S Cluster Biogenesis Pathways by IscR Is Essential for Viability of Escherichia coli

(2014) E. L. Mettert et al.   JOURNAL OF BACTERIOLOGY

Structure of the Zymomonas mobilis respiratory chain: oxygen affinity of electron transport and the role of cytochrome c peroxidase

(2014) E. Balodite et al.   MICROBIOLOGY-SGM

Metabolic Engineering of Microorganisms for the Production of Higher Alcohols

(2014) Y. J. Choi et al.   mBio

Methylerythritol Phosphate Pathway of Isoprenoid Biosynthesis

(2013) Lishan Zhao et al.   Annual Review of Biochemistry

Heterologous expression and characterization of bacterial 2-C-methyl-d-erythritol-4-phosphate pathway in Saccharomyces cerevisiae

(2013) Simon Carlsen et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Structure of the (E)-4-hydroxy-3-methyl-but-2-enyl-diphosphate reductase fromPlasmodium falciparum

(2013) Ingo Rekittke et al.   FEBS LETTERS

Cytochromebdoxidase fromEscherichia colidisplays high catalase activity: An additional defense against oxidative stress

(2013) Vitaliy B. Borisov et al.   FEBS LETTERS

Dissecting a complex chemical stress: chemogenomic profiling of plant hydrolysates

(2013) J. M. Skerker et al.   Molecular Systems Biology

Combinatorial Engineering of 1-Deoxy-D-Xylulose 5-Phosphate Pathway Using Cross-Lapping In Vitro Assembly (CLIVA) Method

(2013) Ruiyang Zou et al.   PLoS One

Silver(I), Mercury(II), Cadmium(II), and Zinc(II) Target Exposed Enzymic Iron-Sulfur Clusters when They Toxify Escherichia coli

(2012) Fang Fang Xu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Electron transport and oxidative stress in Zymomonas mobilis respiratory mutants

(2012) Inese Strazdina et al.   ARCHIVES OF MICROBIOLOGY

Influence of oxidative and nitrosative stress on accumulation of diphosphate intermediates of the non-mevalonate pathway of isoprenoid biosynthesis in corynebacteria and mycobacteria

(2012) V. Yu. Artsatbanov et al.   BIOCHEMISTRY-MOSCOW

Metabolite Profiling Identified Methylerythritol Cyclodiphosphate Efflux as a Limiting Step in Microbial Isoprenoid Production

(2012) Kang Zhou et al.   PLoS One

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Structural studies on the enzyme complex isopropylmalate isomerase (LeuCD) fromMycobacterium tuberculosis

(2010) Karuppasamy Manikandan et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Transcriptomic and metabolomic profiling of Zymomonas mobilis during aerobic and anaerobic fermentations

(2009) Shihui Yang et al.   BMC GENOMICS

Oxidation of Cysteine 645 of Cobalamin-Independent Methionine Synthase Causes a Methionine Limitation in Escherichia coli

(2009) E. R. Hondorp et al.   JOURNAL OF BACTERIOLOGY

Cellular Defenses against Superoxide and Hydrogen Peroxide

(2008) James A. Imlay   Annual Review of Biochemistry

NADH dehydrogenase deficiency results in low respiration rate and improved aerobic growth of Zymomonas mobilis

(2008) U. Kalnenieks et al.   MICROBIOLOGY-SGM

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Accumulation of 2-C-methyl-d-erythritol 2,4-cyclodiphosphate in illuminated plant leaves at supraoptimal temperatures reveals a bottleneck of the prokaryotic methylerythritol 4-phosphate pathway of isoprenoid biosynthesis

(2008) CORINNE RIVASSEAU et al.   PLANT CELL AND ENVIRONMENT

Analysis of the Respiratory Chain in Ethanologenic Zymomonas mobilis with a Cyanide-Resistant bd-Type Ubiquinol Oxidase as the Only Terminal Oxidase and Its Possible Physiological Roles

(2007) Kaewta Sootsuwan et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY