Genome Comparisons of Candida glabrata Serial Clinical Isolates Reveal Patterns of Genetic Variation in Infecting Clonal Populations

Patterns of Genomic Variation in the Opportunistic Pathogen Candida glabrata Suggest the Existence of Mating and a Secondary Association with Humans

(2018) Laia Carreté et al.   CURRENT BIOLOGY

Genomes shed light on the secret life of Candida glabrata: not so asexual, not so commensal

(2018) Toni Gabaldón et al.   CURRENT GENETICS

Molecular characterization of the silencing complex SIR in Candida glabrata hyperadherent clinical isolates

(2018) Osney Leiva-Peláez et al.   FUNGAL GENETICS AND BIOLOGY

CgPDR1 gain-of-function mutations lead to azole-resistance and increased adhesion in clinical Candida glabrata strains

(2018) Qi Ni et al.   MYCOSES

Evolutionary Emergence of Drug Resistance in Candida Opportunistic Pathogens

(2018) Ewa Ksiezopolska et al.   Genes

Comparative genomics of serial Candida glabrata isolates and the rapid acquisition of echinocandin resistance during therapy

(2018) Amelia E. Barber et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Comparative Genomics of Two Sequential Candida glabrata Clinical Isolates

(2017) Luis Vale-Silva et al.   G3-Genes Genomes Genetics

Growthcurver: an R package for obtaining interpretable metrics from microbial growth curves

(2016) Kathleen Sprouffske et al.   BMC BIOINFORMATICS

Prevalent mutator genotype identified in fungal pathogen Candida glabrata promotes multi-drug resistance

(2016) Kelley R. Healey et al.   Nature Communications

The evolution of drug resistance in clinical isolates of Candida albicans

(2015) Christopher B Ford et al.   eLife

Echinocandin resistance

(2014) Maiken C. Arendrup et al.   CURRENT OPINION IN INFECTIOUS DISEASES

Genetic and phenotypic intra-species variation inCandida albicans

(2014) Matthew P. Hirakawa et al.   GENOME RESEARCH

Identification of Candida glabrata Genes Involved in pH Modulation and Modification of the Phagosomal Environment in Macrophages

(2014) Lydia Kasper et al.   PLoS One

Comparative genomics of emerging pathogens in the Candida glabrata clade

(2013) Toni Gabaldón et al.   BMC GENOMICS

Fks1 and Fks2 Are Functionally Redundant but Differentially Regulated in Candida glabrata: Implications for Echinocandin Resistance

(2012) Santosh K. Katiyar et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

EUCAST technical note on the EUCAST definitive document EDef 7.2: method for the determination of broth dilution minimum inhibitory concentrations of antifungal agents for yeasts EDef 7.2 (EUCAST-AFST)*

(2012) Maiken C. Arendrup et al.   CLINICAL MICROBIOLOGY AND INFECTION

CRS-MIS inCandida glabrata: sphingolipids modulate echinocandin-Fks interaction

(2012) Kelley R. Healey et al.   MOLECULAR MICROBIOLOGY

Hidden Killers: Human Fungal Infections

(2012) G. D. Brown et al.   Science Translational Medicine

Global Analysis of the Evolution and Mechanism of Echinocandin Resistance in Candida glabrata

(2012) Sheena D. Singh-Babak et al.   PLoS Pathogens

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization

(2010) Valentina Boeva et al.   BIOINFORMATICS

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

From Saccharomyces cerevisiae to Candida glabrata in a few easy steps: important adaptations for an opportunistic pathogen

(2010) Andreas Roetzer et al.   FEMS MICROBIOLOGY LETTERS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Multilocus Microsatellite Markers for Molecular Typing of Candida glabrata: Application to Analysis of Genetic Relationships between Bloodstream and Digestive System Isolates

(2010) A. Enache-Angoulvant et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Formation of new chromosomes as a virulence mechanism in yeastCandida glabrata

(2009) Silvia Poláková et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gain of Function Mutations in CgPDR1 of Candida glabrata Not Only Mediate Antifungal Resistance but Also Enhance Virulence

(2009) Sélène Ferrari et al.   PLoS Pathogens

Changing epidemiology of systemic fungal infections

(2008) M. Richardson et al.   CLINICAL MICROBIOLOGY AND INFECTION

Genomic polymorphism in the population of Candida glabrata: Gene copy-number variation and chromosomal translocations

(2008) Héloïse Muller et al.   FUNGAL GENETICS AND BIOLOGY

Mutations in the multi-drug resistance regulatorMRR1, followed by loss of heterozygosity, are the main cause ofMDR1overexpression in fluconazole-resistantCandida albicansstrains

(2008) Nico Dunkel et al.   MOLECULAR MICROBIOLOGY

A genome-wide view of the spectrum of spontaneous mutations in yeast

(2008) M. Lynch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA