Advances in understanding salt tolerance in rice

Brevibacterium linens RS16 confers salt tolerance to Oryza sativa genotypes by regulating antioxidant defense and H + ATPase activity

(2018) Poulami Chatterjee et al.   MICROBIOLOGICAL RESEARCH

Identification of jumonjiC domain containing gene family among the Oryza species and their expression analysis in FL478, a salt tolerant rice genotype

(2018) Soni Chowrasia et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Inoculation of Brevibacterium linens RS16 in Oryza sativa genotypes enhanced salinity resistance: Impacts on photosynthetic traits and foliar volatile emissions

(2018) Poulami Chatterjee et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Nano titanium dioxide and nitric oxide alleviate salt induced changes in seedling growth, physiological and photosynthesis attributes of barley

(2018) Afshin Karami et al.   Zemdirbyste-Agriculture

Identification of QTN and candidate genes for Salinity Tolerance at the Germination and Seedling Stages in Rice by Genome-Wide Association Analyses

(2018) Shahzad Amir Naveed et al.   Scientific Reports

Discovery of microRNA-target modules of African rice (Oryza glaberrima) under salinity stress

(2018) Tapan Kumar Mondal et al.   Scientific Reports

Hydroxyl radical scavenging by cerium oxide nanoparticles improves Arabidopsis salinity tolerance by enhancing leaf mesophyll potassium retention

(2018) Honghong Wu et al.   Environmental Science-Nano

Characterization of OglDREB2A gene from African rice (Oryza glaberrima), comparative analysis and its transcriptional regulation under salinity stress

(2018) Abubakar Mohammad Gumi et al.   3 Biotech

Characterization of OglDREB2A gene from African rice (Oryza glaberrima), comparative analysis and its transcriptional regulation under salinity stress

(2018) Abubakar Mohammad Gumi et al.   3 Biotech

Draft genome sequence of first monocot-halophytic species Oryza coarctata reveals stress-specific genes

(2018) Tapan Kumar Mondal et al.   Scientific Reports

The contribution of nano-zinc to alleviate salinity stress on cotton plants

(2018) M. M. Hussein et al.   Royal Society Open Science

Effect of interaction between salinity and nanoparticles (Fe2O3 and ZnO) on physiological parameters of Zea mays L.

(2017) Alireza Fathi et al.   JOURNAL OF PLANT NUTRITION

Nanopriming technology for enhancing germination and starch metabolism of aged rice seeds using phytosynthesized silver nanoparticles

(2017) Wuttipong Mahakham et al.   Scientific Reports

Genome-wide analysis of DUF221 domain-containing gene family in Oryza species and identification of its salinity stress-responsive members in rice

(2017) Showkat Ahmad Ganie et al.   PLoS One

Influence of Silver Nano-particles on the Salt Resistance of Tomato (Solanum lycopersicum) during Germination

(2016) Zainab M. Almutairi   INTERNATIONAL JOURNAL OF AGRICULTURE AND BIOLOGY

Identification and analysis of novel salt responsive candidate gene based SSRs (cgSSRs) from rice (Oryza sativa L.)

(2015) Kutubuddin Ali Molla et al.   BMC PLANT BIOLOGY

Genome-wide association mapping of salinity tolerance in rice (Oryza sativa)

(2015) V. Kumar et al.   DNA RESEARCH

Promoter methylation regulates the abundance of osa-miR393a in contrasting rice genotypes under salinity stress

(2015) Showkat Ahmad Ganie et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

A review of the use of engineered nanomaterials to suppress plant disease and enhance crop yield

(2015) Alia Servin et al.   JOURNAL OF NANOPARTICLE RESEARCH

Genome-wide development of novel miRNA-based microsatellite markers of rice (Oryza sativa) for genotyping applications

(2015) Showkat Ahmad Ganie et al.   MOLECULAR BREEDING

The Rice High-Affinity Potassium Transporter1;1 Is Involved in Salt Tolerance and Regulated by an MYB-Type Transcription Factor

(2015) Rong Wang et al.   PLANT PHYSIOLOGY

Salt Tolerant and Sensitive Rice Varieties Display Differential Methylome Flexibility under Salt Stress

(2015) Liliana J. Ferreira et al.   PLoS One

Identification of Novel and Conserved miRNAs from Extreme Halophyte, Oryza coarctata, a Wild Relative of Rice

(2015) Tapan Kumar Mondal et al.   PLoS One

Assessment of genetic diversity in salt-tolerant rice and its wild relatives for ten SSR loci and one allele mining primer of salT gene located on 1st chromosome

(2014) Showkat Ahmad Ganie et al.   PLANT SYSTEMATICS AND EVOLUTION

Comparative Metabolite Profiling of Two Rice Genotypes with Contrasting Salt Stress Tolerance at the Seedling Stage

(2014) Xiuqin Zhao et al.   PLoS One

Genome duplication improves rice root resistance to salt stress

(2014) Yi Tu et al.   Rice

Identifying the genes underlying quantitative traits: a rationale for the QTN programme

(2014) Young Wha Lee et al.   AoB Plants

Biochemical and Anatomical Changes and Yield Reduction in Rice (Oryza sativaL.) under Varied Salinity Regimes

(2014) M. A. Hakim et al.   Biomed Research International

CGtag: complete genomics toolkit and annotation in a cloud-based Galaxy

(2014) Saskia Hiltemann et al.   GigaScience

Salinity tolerance, Na+ exclusion and allele mining of HKT1;5 in Oryza sativa and O. glaberrima: many sources, many genes, one mechanism?

(2013) John Damien Platten et al.   BMC PLANT BIOLOGY

Identification and characterization of salt responsive miRNA-SSR markers in rice (Oryza sativa)

(2013) Tapan Kumar Mondal et al.   GENE

Genome-Wide Survey on Genomic Variation, Expression Divergence, and Evolution in Two Contrasting Rice Genotypes under High Salinity Stress

(2013) Shu-Ye Jiang et al.   Genome Biology and Evolution

A Rice Immunophilin Gene, OsFKBP16-3, Confers Tolerance to Environmental Stress in Arabidopsis and Rice

(2013) Hyun Park et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Homologous expression of γ-glutamylcysteine synthetase increases grain yield and tolerance of transgenic rice plants to environmental stresses

(2013) Yong-Hoe Choe et al.   JOURNAL OF PLANT PHYSIOLOGY

Physiology and proteome responses of two contrasting rice mutants and their wild type parent under salt stress conditions at the vegetative stage

(2013) Akram Ghaffari et al.   JOURNAL OF PLANT PHYSIOLOGY

Genomewide discovery of DNA polymorphisms in rice cultivars with contrasting drought and salinity stress response and their functional relevance

(2013) Mukesh Jain et al.   PLANT BIOTECHNOLOGY JOURNAL

SALT-RESPONSIVE ERF1 Regulates Reactive Oxygen Species-Dependent Signaling during the Initial Response to Salt Stress in Rice

(2013) R. Schmidt et al.   PLANT CELL

OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice

(2013) Citao Liu et al.   PLANT MOLECULAR BIOLOGY

OsTZF1, a CCCH-Tandem Zinc Finger Protein, Confers Delayed Senescence and Stress Tolerance in Rice by Regulating Stress-Related Genes

(2013) A. Jan et al.   PLANT PHYSIOLOGY

Clustered metallothionein genes are co-regulated in rice and ectopic expression of OsMT1e-P confers multiple abiotic stress tolerance in tobacco via ROS scavenging

(2012) Gautam Kumar et al.   BMC PLANT BIOLOGY

High throughput sequencing reveals novel and abiotic stress-regulated microRNAs in the inflorescences of rice

(2012) Blanca E Barrera-Figueroa et al.   BMC PLANT BIOLOGY

microRNAs targeting DEAD-box helicases are involved in salinity stress response in rice (Oryza sativa L.)

(2012) Anca Macovei et al.   BMC PLANT BIOLOGY

The SNAC1-targeted gene OsSRO1c modulates stomatal closure and oxidative stress tolerance by regulating hydrogen peroxide in rice

(2012) Jun You et al.   JOURNAL OF EXPERIMENTAL BOTANY

A R2R3-type MYB gene, OsMYB2, is involved in salt, cold, and dehydration tolerance in rice

(2012) An Yang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Overexpression of OsHsp17.0 and OsHsp23.7 enhances drought and salt tolerance in rice

(2012) Jie Zou et al.   JOURNAL OF PLANT PHYSIOLOGY

Overexpression of OrbHLH001, a putative helix–loop–helix transcription factor, causes increased expression of AKT1 and maintains ionic balance under salt stress in rice

(2012) Yuan Chen et al.   JOURNAL OF PLANT PHYSIOLOGY

Down-regulation of OsPDCD5, a homolog of the mammalian PDCD5, increases rice tolerance to salt stress

(2012) Mengfei Yang et al.   MOLECULAR BREEDING

New allelic variants found in key rice salt-tolerance genes: an association study

(2012) Sónia Negrão et al.   PLANT BIOTECHNOLOGY JOURNAL

Rice choline monooxygenase (OsCMO) protein functions in enhancing glycine betaine biosynthesis in transgenic tobacco but does not accumulate in rice (Oryza sativa L. ssp. japonica)

(2012) Di Luo et al.   PLANT CELL REPORTS

HKT2;2/1, a K+-permeable transporter identified in a salt-tolerant rice cultivar through surveys of natural genetic polymorphism

(2012) Ronald J.F.J. Oomen et al.   PLANT JOURNAL

Function of the HD-Zip I gene Oshox22 in ABA-mediated drought and salt tolerances in rice

(2012) Shuxin Zhang et al.   PLANT MOLECULAR BIOLOGY

Functional screening of cDNA library from a salt tolerant rice genotype Pokkali identifies mannose-1-phosphate guanyl transferase gene (OsMPG1) as a key member of salinity stress response

(2012) Ritesh Kumar et al.   PLANT MOLECULAR BIOLOGY

Proteomic analysis of rice anthers under salt stress

(2012) Elham Sarhadi et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

OsMIOX, a myo-inositol oxygenase gene, improves drought tolerance through scavenging of reactive oxygen species in rice (Oryza sativa L.)

(2012) Junzhi Duan et al.   PLANT SCIENCE

OsTIR1 and OsAFB2 Downregulation via OsmiR393 Overexpression Leads to More Tillers, Early Flowering and Less Tolerance to Salt and Drought in Rice

(2012) Kuaifei Xia et al.   PLoS One

Salt Stress Induced Variation in DNA Methylation Pattern and Its Influence on Gene Expression in Contrasting Rice Genotypes

(2012) Ratna Karan et al.   PLoS One

OsLEA3-2, an Abiotic Stress Induced Gene of Rice Plays a Key Role in Salt and Drought Tolerance

(2012) Jianli Duan et al.   PLoS One

Comparative proteomic analysis of early salt stress-responsive proteins in roots of SnRK2 transgenic rice

(2012) Myung Hee Nam et al.   Proteome Science

Transcription factor OsHsfC1b regulates salt tolerance and development in Oryza sativa ssp. japonica

(2012) Romy Schmidt et al.   AoB Plants

Introduction of OsglyII gene into Oryza sativa for increasing salinity tolerance

(2011) S. H. Wani et al.   BIOLOGIA PLANTARUM

Expression of OsDREB2A transcription factor confers enhanced dehydration and salt stress tolerance in rice (Oryza sativa L.)

(2011) Garladinne Mallikarjuna et al.   BIOTECHNOLOGY LETTERS

Proteomic identification of OsCYP2, a rice cyclophilin that confers salt tolerance in rice (Oryza sativa L.) seedlings when overexpressed

(2011) Song-Lin Ruan et al.   BMC PLANT BIOLOGY

Proteomics analysis of salt-induced leaf proteins in two rice germplasms with different salt sensitivity

(2011) Dong-Gi Lee et al.   CANADIAN JOURNAL OF PLANT SCIENCE

Recent Updates on Salinity Stress in Rice: From Physiological to Molecular Responses

(2011) S. Negrão et al.   CRITICAL REVIEWS IN PLANT SCIENCES

Genome instability and epigenetic modification—heritable responses to environmental stress?

(2011) Alex Boyko et al.   CURRENT OPINION IN PLANT BIOLOGY

Genetic analysis of abiotic stress tolerance in crops

(2011) Stuart J Roy et al.   CURRENT OPINION IN PLANT BIOLOGY

Overexpression of the mitogen-activated protein kinase gene OsMAPK33 enhances sensitivity to salt stress in rice (Oryza sativa L.)

(2011) Seong-Kon Lee et al.   JOURNAL OF BIOSCIENCES

Identification of NaCl stress-responsive apoplastic proteins in rice shoot stems by 2D-DIGE

(2011) Yun Song et al.   Journal of Proteomics

Plant proteome changes under abiotic stress — Contribution of proteomics studies to understanding plant stress response

(2011) Klára Kosová et al.   Journal of Proteomics

Massive Analysis of Rice Small RNAs: Mechanistic Implications of Regulated MicroRNAs and Variants for Differential Target RNA Cleavage

(2011) D.-H. Jeong et al.   PLANT CELL

Overexpression of a cytosolic glyceraldehyde-3-phosphate dehydrogenase gene OsGAPC3 confers salt tolerance in rice

(2011) Xiu-Hong Zhang et al.   PLANT CELL TISSUE AND ORGAN CULTURE

A rice calcium-dependent protein kinase OsCPK12 oppositely modulates salt-stress tolerance and blast disease resistance

(2011) Takayuki Asano et al.   PLANT JOURNAL

OsSDIR1 overexpression greatly improves drought tolerance in transgenic rice

(2011) Ting Gao et al.   PLANT MOLECULAR BIOLOGY

K+ Transport by the OsHKT2;4 Transporter from Rice with Atypical Na+ Transport Properties and Competition in Permeation of K+ over Mg2+ and Ca2+ Ions

(2011) T. Horie et al.   PLANT PHYSIOLOGY

Overexpression of the trehalose-6-phosphate synthase gene OsTPS1 enhances abiotic stress tolerance in rice

(2011) Hao-Wen Li et al.   PLANTA

Global food demand and the sustainable intensification of agriculture

(2011) D. Tilman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The role of tocopherol cyclase in salt stress tolerance of rice (Oryza sativa)

(2011) ShouQiang Ouyang et al.   Science China-Life Sciences

Targeted association analysis identified japonica rice varieties achieving Na+/K+ homeostasis without the allelic make-up of the salt tolerant indica variety Nona Bokra

(2011) N. Ahmadi et al.   THEORETICAL AND APPLIED GENETICS

RSS1 regulates the cell cycle and maintains meristematic activity under stress conditions in rice

(2011) Daisuke Ogawa et al.   Nature Communications

Metabolomics: Creating new potentials for unraveling the mechanisms in response to salt and drought stress and for the biotechnological improvement of xero-halophytes

(2010) Cheng-Jiang Ruan et al.   CRITICAL REVIEWS IN BIOTECHNOLOGY

Rice sodium-insensitive potassium transporter, OsHAK5, confers increased salt tolerance in tobacco BY2 cells

(2010) Tomoaki Horie et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Functional analysis of a novel Cys2/His2-type zinc finger protein involved in salt tolerance in rice

(2010) S.-J. Sun et al.   JOURNAL OF EXPERIMENTAL BOTANY

Overexpression of OsVP1 and OsNHX1 Increases Tolerance to Drought and Salinity in Rice

(2010) Shiping Liu et al.   JOURNAL OF PLANT BIOLOGY

The ABRE-binding bZIP transcription factor OsABF2 is a positive regulator of abiotic stress and ABA signaling in rice

(2010) Md. Amir Hossain et al.   JOURNAL OF PLANT PHYSIOLOGY

osa-MIR393: a salinity- and alkaline stress-related microRNA gene

(2010) Peng Gao et al.   MOLECULAR BIOLOGY REPORTS

Global expression profiling of rice microRNAs by one-tube stem-loop reverse transcription quantitative PCR revealed important roles of microRNAs in abiotic stress responses

(2010) Jianqiang Shen et al.   MOLECULAR GENETICS AND GENOMICS

The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice

(2010) Hironori Takasaki et al.   MOLECULAR GENETICS AND GENOMICS

OsPUB15, an E3 ubiquitin ligase, functions to reduce cellular oxidative stress during seedling establishment

(2010) Jong-Jin Park et al.   PLANT JOURNAL

A RING finger E3 ligase gene, Oryza sativa Delayed Seed Germination 1 (OsDSG1), controls seed germination and stress responses in rice

(2010) Gi-Gyeong Park et al.   PLANT MOLECULAR BIOLOGY

Root-Specific Expression of OsNAC10 Improves Drought Tolerance and Grain Yield in Rice under Field Drought Conditions

(2010) J. S. Jeong et al.   PLANT PHYSIOLOGY

Over-expression of osa-MIR396c decreases salt and alkali stress tolerance

(2010) Peng Gao et al.   PLANTA

Characterizing the Saltol Quantitative Trait Locus for Salinity Tolerance in Rice

(2010) Michael J. Thomson et al.   Rice

Polyploidy and angiosperm diversification

(2009) Douglas E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Members of miR-169 family are induced by high salinity and transiently inhibit the NF-YA transcription factor

(2009) Botao Zhao et al.   BMC MOLECULAR BIOLOGY

Exploring transcriptional signalling mediated by OsWRKY13, a potential regulator of multiple physiological processes in rice

(2009) Deyun Qiu et al.   BMC PLANT BIOLOGY

Sequence and expression analysis of the C3HC4-type RING finger gene family in rice

(2009) Ke Ma et al.   GENE

A previously unknown zinc finger protein, DST, regulates drought and salt tolerance in rice via stomatal aperture control

(2009) X.-Y. Huang et al.   GENES & DEVELOPMENT

Differentially expressed membrane transporters in rice roots may contribute to cultivar dependent salt tolerance

(2009) Prasad Senadheera et al.   JOURNAL OF EXPERIMENTAL BOTANY

TheOsDHODH1Gene is Involved in Salt and Drought Tolerance in Rice

(2009) Wen-Ying Liu et al.   Journal of Integrative Plant Biology

NaCl-induced expression of glutathione reductase in roots of rice (Oryza sativa L.) seedlings is mediated through hydrogen peroxide but not abscisic acid

(2009) Chwan-Yang Hong et al.   PLANT AND SOIL

Expression of Indica rice OsBADH1 gene under salinity stress in transgenic tobacco

(2009) Supaporn Hasthanasombut et al.   Plant Biotechnology Reports

Overexpression of a rice gene encoding a small C2 domain protein OsSMCP1 increases tolerance to abiotic and biotic stresses in transgenic Arabidopsis

(2009) Naoki Yokotani et al.   PLANT MOLECULAR BIOLOGY

Mitochondrial proteome during salt stress-induced programmed cell death in rice

(2009) Xi Chen et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Proteomics reveals the effects of gibberellic acid (GA3) on salt-stressed rice (Oryza sativa L.) shoots

(2009) Fu-ping Wen et al.   PLANT SCIENCE

OsMSRA4.1 and OsMSRB1.1, two rice plastidial methionine sulfoxide reductases, are involved in abiotic stress responses

(2009) Xiaoli Guo et al.   PLANTA

Tolerance to various environmental stresses conferred by the salt-responsive rice gene ONAC063 in transgenic Arabidopsis

(2009) Naoki Yokotani et al.   PLANTA

New changes in the plasma-membrane-associated proteome of rice roots under salt stress

(2009) Yanwei Cheng et al.   PROTEOMICS

The SNF1-type serine-threonine protein kinase SAPK4 regulates stress-responsive gene expression in rice

(2008) Calliste J Diédhiou et al.   BMC PLANT BIOLOGY

Identification of novel and candidate miRNAs in rice by high throughput sequencing

(2008) Ramanjulu Sunkar et al.   BMC PLANT BIOLOGY

Expression of a rice gene OsNOA1 re-establishes nitric oxide synthesis and stress-related gene expression for salt tolerance in Arabidopsis nitric oxide-associated 1 mutant Atnoa1

(2008) W QIAO et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Overexpression of a TFIIIA-type zinc finger protein geneZFP252enhances drought and salt tolerance in rice (Oryza sativaL.)

(2008) Dong-Qing Xu et al.   FEBS LETTERS

Transcriptome map for seedling stage specific salinity stress response indicates a specific set of genes as candidate for saline tolerance in Oryza sativa L.

(2008) Sumita Kumari et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Overexpression of a New Rice Vacuolar Antiporter Regulating Protein OsARP Improves Salt Tolerance in Tobacco

(2008) Md. I. Uddin et al.   PLANT AND CELL PHYSIOLOGY

Quantifying the three main components of salinity tolerance in cereals

(2008) KARTHIKA RAJENDRAN et al.   PLANT CELL AND ENVIRONMENT

A bZIP transcription factor, OsABI5, is involved in rice fertility and stress tolerance

(2008) Meijuan Zou et al.   PLANT MOLECULAR BIOLOGY

Characterization of transcription factor gene SNAC2 conferring cold and salt tolerance in rice

(2008) Honghong Hu et al.   PLANT MOLECULAR BIOLOGY

Overexpression of a rice OsDREB1F gene increases salt, drought, and low temperature tolerance in both Arabidopsis and rice

(2008) Qiuyun Wang et al.   PLANT MOLECULAR BIOLOGY

Characterization of OsbZIP23 as a Key Player of the Basic Leucine Zipper Transcription Factor Family for Conferring Abscisic Acid Sensitivity and Salinity and Drought Tolerance in Rice

(2008) Y. Xiang et al.   PLANT PHYSIOLOGY

Identification of an Apoplastic Protein Involved in the Initial Phase of Salt Stress Response in Rice Root by Two-Dimensional Electrophoresis

(2008) L. Zhang et al.   PLANT PHYSIOLOGY

Overexpression of the trehalose-6-phosphate phosphatase gene OsTPP1 confers stress tolerance in rice and results in the activation of stress responsive genes

(2008) Liang-Fa Ge et al.   PLANTA