Gene expression profiling of tomato roots interacting with Pseudomonas fluorescens unravels the molecular reprogramming that occurs during the early phases of colonization
出版年份 2019 全文链接
标题
Gene expression profiling of tomato roots interacting with Pseudomonas fluorescens unravels the molecular reprogramming that occurs during the early phases of colonization
作者
关键词
<em class="EmphasisTypeItalic ">Solanum lycopersicum</em>, Plant-PGPR interaction, Beneficial microorganisms, RNASeq transcriptome
出版物
SYMBIOSIS
Volume -, Issue -, Pages -
出版商
Springer Nature
发表日期
2019-03-13
DOI
10.1007/s13199-019-00611-9
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- The Role of Tomato WRKY Genes in Plant Responses to Combined Abiotic and Biotic Stresses
- (2018) Yuling Bai et al. Frontiers in Plant Science
- Transcriptome reprogramming, epigenetic modifications and alternative splicing orchestrate the tomato root response to the beneficial fungus Trichoderma harzianum
- (2018) Monica De Palma et al. Horticulture Research
- Root transcriptional dynamics induced by beneficial rhizobacteria and microbial immune elicitors reveal signatures of adaptation to mutualists
- (2017) Ioannis A. Stringlis et al. PLANT JOURNAL
- Comparative transcriptome analysis between Solanum lycopersicum L. and Lotus japonicus L. during arbuscular mycorrhizal development
- (2017) Yusaku Sugimura et al. SOIL SCIENCE AND PLANT NUTRITION
- Plant hormone-mediated regulation of stress responses
- (2016) Vivek Verma et al. BMC PLANT BIOLOGY
- InterPro in 2017—beyond protein family and domain annotations
- (2016) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Plant–microbe interactions: manipulating signals to enhance agricultural sustainability and environmental security
- (2016) Timothy S. George et al. PLANT GROWTH REGULATION
- RNA-seq analysis reveals the role of red light in resistance against Pseudomonas syringae pv. tomato DC3000 in tomato plants
- (2015) You-Xin Yang et al. BMC GENOMICS
- Tomato Sl3-MMP, a member of the Matrix metalloproteinase family, is required for disease resistance against Botrytis cinerea and Pseudomonas syringae pv. tomato DC3000
- (2015) Dayong Li et al. BMC PLANT BIOLOGY
- Plant NB-LRR proteins: tightly regulated sensors in a complex manner
- (2015) Hyun-Ah Lee et al. Briefings in Functional Genomics
- Regulatory Proteolysis in Arabidopsis-Pathogen Interactions
- (2015) Miklós Pogány et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Ectopic Expression of a Proteinase Inhibitor I4 (MtPiI4) Gene from Medicago truncatula Confers Plant Resistance to Pseudomonas syringae pv. Tomato DC3000
- (2015) Di Sun et al. PLANT MOLECULAR BIOLOGY REPORTER
- Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast
- (2015) Zsolt Kelemen et al. PLoS One
- Transcriptome analysis of the compatible interaction of tomato with Verticillium dahliae using RNA-sequencing
- (2015) Guangxuan Tan et al. Frontiers in Plant Science
- Pseudomonas spp. as models for plant-microbe interactions
- (2015) Ramakrishnan Sitaraman Frontiers in Plant Science
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Dual RNA-seq transcriptional analysis of wheat roots colonized by Azospirillum brasilense reveals up-regulation of nutrient acquisition and cell cycle genes
- (2014) Doumit Camilios-Neto et al. BMC GENOMICS
- Involvement of plant endogenous ABA in Bacillus megaterium PGPR activity in tomato plants
- (2014) Rosa Porcel et al. BMC PLANT BIOLOGY
- Deep sequencing-based transcriptome profiling analysis of Chlamys farreri exposed to benzo[a]pyrene
- (2014) Yuefeng Cai et al. GENE
- Genome-wide identification and characterization of R2R3MYB family in Solanum lycopersicum
- (2014) Panpan Zhao et al. MOLECULAR GENETICS AND GENOMICS
- Mutation of the Arabidopsis Calmodulin-Like Protein CML37 Deregulates the Jasmonate Pathway and Enhances Susceptibility to Herbivory
- (2014) Sandra S. Scholz et al. Molecular Plant
- Emerging Functions of Nodulin-Like Proteins in Non-Nodulating Plant Species
- (2014) Nicolas Denancé et al. PLANT AND CELL PHYSIOLOGY
- Plant root transcriptome profiling reveals a strain-dependent response during Azospirillum-rice cooperation
- (2014) Benoît Drogue et al. Frontiers in Plant Science
- 1-aminocyclopropane-1-carboxylic acid (ACC) in plants: more than just the precursor of ethylene!
- (2014) Bram Van de Poel et al. Frontiers in Plant Science
- Subtilisin-like proteases in plant–pathogen recognition and immune priming: a perspective
- (2014) Andreia Figueiredo et al. Frontiers in Plant Science
- Plant Nucleotide Binding Site–Leucine-Rich Repeat (NBS-LRR) Genes: Active Guardians in Host Defense Responses
- (2013) Daniela Marone et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Light-harvesting chlorophyll a/b-binding proteins, positively involved in abscisic acid signalling, require a transcription repressor, WRKY40, to balance their function
- (2013) Rui Liu et al. JOURNAL OF EXPERIMENTAL BOTANY
- APETALA2/Ethylene Responsive Factor (AP2/ERF) transcription factors: mediators of stress responses and developmental programs
- (2013) Francesco Licausi et al. NEW PHYTOLOGIST
- GoMapMan: integration, consolidation and visualization of plant gene annotations within the MapMan ontology
- (2013) Živa Ramšak et al. NUCLEIC ACIDS RESEARCH
- Calmodulin-Related Proteins Step Out from the Shadow of Their Namesake
- (2013) K. W. Bender et al. PLANT PHYSIOLOGY
- WRKY8 transcription factor functions in the TMV-cg defense response by mediating both abscisic acid and ethylene signaling in Arabidopsis
- (2013) L. Chen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Role of Tomato Lipoxygenase D in Wound-Induced Jasmonate Biosynthesis and Plant Immunity to Insect Herbivores
- (2013) Liuhua Yan et al. PLoS Genetics
- Plant growth-promoting rhizobacteria and root system functioning
- (2013) Jordan Vacheron et al. Frontiers in Plant Science
- Getting the ecology into interactions between plants and the plant growth-promoting bacterium Pseudomonas fluorescens
- (2013) W. H. Gera Hol et al. Frontiers in Plant Science
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- MYB transcription factor genes as regulators for plant responses: an overview
- (2013) Supriya Ambawat et al. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS
- Ethylene and the regulation of plant development
- (2012) G Schaller BMC BIOLOGY
- Genome-wide analysis of WRKY transcription factors in Solanum lycopersicum
- (2012) Shengxiong Huang et al. MOLECULAR GENETICS AND GENOMICS
- Dissecting Phaseolus vulgaris Innate Immune System against Colletotrichum lindemuthianum Infection
- (2012) Paula Rodrigues Oblessuc et al. PLoS One
- Light-harvesting chlorophyll a/b-binding proteins are required for stomatal response to abscisic acid in Arabidopsis
- (2011) Yan-Hong Xu et al. JOURNAL OF EXPERIMENTAL BOTANY
- Soil Microorganisms Mediating Phosphorus Availability Update on Microbial Phosphorus
- (2011) A. E. Richardson et al. PLANT PHYSIOLOGY
- The Plant Pathogen Pseudomonas syringae pv. tomato Is Genetically Monomorphic and under Strong Selection to Evade Tomato Immunity
- (2011) Rongman Cai et al. PLoS Pathogens
- Control of salicylic acid synthesis and systemic acquired resistance by two members of a plant-specific family of transcription factors
- (2010) Y. Zhang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- WRKY transcription factors
- (2010) Paul J. Rushton et al. TRENDS IN PLANT SCIENCE
- Plant-Growth-Promoting Rhizobacteria
- (2009) Ben Lugtenberg et al. Annual Review of Microbiology
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- TheMedicago truncatula N5Gene Encoding a Root-Specific Lipid Transfer Protein Is Required for the Symbiotic Interaction withSinorhizobium meliloti
- (2009) Youry Pii et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- Transcriptional Regulation of the Ethylene Response Factor LeERF2 in the Expression of Ethylene Biosynthesis Genes Controls Ethylene Production in Tomato and Tobacco
- (2009) Z. Zhang et al. PLANT PHYSIOLOGY
- Role of Recombination in the Evolution of the Model Plant Pathogen Pseudomonas syringae pv. tomato DC3000, a Very Atypical Tomato Strain
- (2008) S. Yan et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- BioVenn – a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams
- (2008) Tim Hulsen et al. BMC GENOMICS
- Comprehensive Transcriptome Analysis of Auxin Responses in Arabidopsis
- (2008) Ivan A. Paponov et al. Molecular Plant
- The biochemistry and biology of extracellular plant lipid-transfer proteins (LTPs)
- (2007) Trevor H. Yeats et al. PROTEIN SCIENCE
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