Evaluating monitoring options for conservation: comparing traditional and environmental DNA tools for a critically endangered mammal

Comparison of environmental DNA metabarcoding and conventional fish survey methods in a river system

(2016) Jennifer L.A. Shaw et al.   BIOLOGICAL CONSERVATION

Environmental DNA (eDNA) detects the invasive rusty crayfish Orconectes rusticus at low abundances

(2016) Matthew M. Dougherty et al.   JOURNAL OF APPLIED ECOLOGY

Environmental DNA metabarcoding of lake fish communities reflects long-term data from established survey methods

(2016) Bernd Hänfling et al.   MOLECULAR ECOLOGY

Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding

(2016) Alice Valentini et al.   MOLECULAR ECOLOGY

Residual eDNA detection sensitivity assessed by quantitative real-time PCR in a river ecosystem

(2016) Katherine D. Balasingham et al.   Molecular Ecology Resources

Characterization, optimization, and validation of environmental DNA (eDNA) markers to detect an endangered aquatic mammal

(2016) Hongjuan Ma et al.   Conservation Genetics Resources

Assessing the cost-efficiency of environmental DNA sampling

(2016) Adam S. Smart et al.   Methods in Ecology and Evolution

Critical considerations for the application of environmental DNA methods to detect aquatic species

(2016) Caren S. Goldberg et al.   Methods in Ecology and Evolution

Mapping Uncertainty Due to Missing Data in the Global Ocean Health Index

(2016) Melanie Frazier et al.   PLoS One

Detection of Invasive Mosquito Vectors Using Environmental DNA (eDNA) from Water Samples

(2016) Judith Schneider et al.   PLoS One

Characterizing the distribution of an endangered salmonid using environmental DNA analysis

(2015) Matthew B. Laramie et al.   BIOLOGICAL CONSERVATION

Quantification of eDNA shedding rates from invasive bighead carp Hypophthalmichthys nobilis and silver carp Hypophthalmichthys molitrix

(2015) Katy E. Klymus et al.   BIOLOGICAL CONSERVATION

Monitoring the near-extinct European weather loach in Denmark based on environmental DNA from water samples

(2015) Eva Egelyng Sigsgaard et al.   BIOLOGICAL CONSERVATION

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

Using eDNA to develop a national citizen science-based monitoring programme for the great crested newt (Triturus cristatus)

(2015) Jeremy Biggs et al.   BIOLOGICAL CONSERVATION

Fecal Bacterial Composition of the Endangered Yangtze Finless Porpoises Living Under Captive and Semi-natural Conditions

(2015) Xiaoling Wan et al.   CURRENT MICROBIOLOGY

A basin-scale application of environmental DNA assessment for rare endemic species and closely related exotic species in rivers: a case study of giant salamanders in Japan

(2015) Sou Fukumoto et al.   JOURNAL OF APPLIED ECOLOGY

Improving efficiency and reliability of environmental DNA analysis for silver carp

(2015) Jon J. Amberg et al.   JOURNAL OF GREAT LAKES RESEARCH

Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding

(2015) Nathan T. Evans et al.   Molecular Ecology Resources

Development and Validation of Environmental DNA (eDNA) Markers for Detection of Freshwater Turtles

(2015) Christina M. Davy et al.   PLoS One

REVIEW: The detection of aquatic animal species using environmental DNA - a review of eDNA as a survey tool in ecology

(2014) Helen C. Rees et al.   JOURNAL OF APPLIED ECOLOGY

Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data

(2014) Gentile F. Ficetola et al.   Molecular Ecology Resources

The PREDICTS database: a global database of how local terrestrial biodiversity responds to human impacts

(2014) Lawrence N. Hudson et al.   Ecology and Evolution

Estimating occupancy and abundance of stream amphibians using environmental DNA from filtered water samples

(2013) David S. Pilliod et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Detection of Asian carp DNA as part of a Great Lakes basin-wide surveillance program

(2013) Christopher L. Jerde et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Detecting an elusive invasive species: a diagnostic PCR to detect Burmese python in Florida waters and an assessment of persistence of environmental DNA

(2013) Antoinette J. Piaggio et al.   Molecular Ecology Resources

Validation of eDNA Surveillance Sensitivity for Detection of Asian Carps in Controlled and Field Experiments

(2013) Andrew R. Mahon et al.   PLoS One

Environmental DNA as a new method for early detection of New Zealand mudsnails (Potamopyrgus antipodarum)

(2013) Caren S. Goldberg et al.   Freshwater Science

Accelerating population decline of Yangtze finless porpoise (Neophocaena asiaeorientalis asiaeorientalis)

(2012) Zhigang Mei et al.   BIOLOGICAL CONSERVATION

Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction

(2012) Jian Ye et al.   BMC BIOINFORMATICS

Improved detection of an alien invasive species through environmental DNA barcoding: the example of the American bullfrogLithobates catesbeianus

(2012) Tony Dejean et al.   JOURNAL OF APPLIED ECOLOGY

Conservation in a cup of water: estimating biodiversity and population abundance from environmental DNA

(2012) DAVID M. LODGE et al.   MOLECULAR ECOLOGY

Estimation of Fish Biomass Using Environmental DNA

(2012) Teruhiko Takahara et al.   PLoS One

Investigating the Potential Use of Environmental DNA (eDNA) for Genetic Monitoring of Marine Mammals

(2012) Andrew D. Foote et al.   PLoS One

Monitoring endangered freshwater biodiversity using environmental DNA

(2011) PHILIP FRANCIS THOMSEN et al.   MOLECULAR ECOLOGY

“Sight-unseen” detection of rare aquatic species using environmental DNA

(2011) Christopher L. Jerde et al.   Conservation Letters

Global indicators of biological invasion: species numbers, biodiversity impact and policy responses

(2010) Melodie A. McGeoch et al.   DIVERSITY AND DISTRIBUTIONS

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

Population status, threats and conservation of the Yangtze finless porpoise

(2009) Ding Wang   Science Bulletin

Species detection using environmental DNA from water samples

(2008) G. F. Ficetola et al.   Biology Letters

Food Habits of Finless Porpoises Neophocaena phocaenoides in Western Kyushu, Japan

(2008) Miki Shirakihara et al.   JOURNAL OF MAMMALOGY