Extended methods for gene-environment-wide interaction scans in studies of admixed individuals with varying degrees of relationships

Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies

(2018) Wei Zhou et al.   NATURE GENETICS

Fast Principal-Component Analysis Reveals Convergent Evolution of ADH1B in Europe and East Asia

(2016) Kevin J. Galinsky et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Control for Population Structure and Relatedness for Binary Traits in Genetic Association Studies via Logistic Mixed Models

(2016) Han Chen et al.   AMERICAN JOURNAL OF HUMAN GENETICS

An efficient genome-wide association test for multivariate phenotypes based on the Fisher combination function

(2016) James J. Yang et al.   BMC BIOINFORMATICS

Accounting for Population Structure in Gene-by-Environment Interactions in Genome-Wide Association Studies Using Mixed Models

(2016) Jae Hoon Sul et al.   PLoS Genetics

Rcpp: SeamlessRandC++Integration

(2015) Dirk Eddelbuettel et al.   Journal of Statistical Software

Gene-Environment Dependence Creates Spurious Gene-Environment Interaction

(2014) Frank Dudbridge et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Genetic Association Analysis under Complex Survey Sampling: The Hispanic Community Health Study/Study of Latinos

(2014) Dan-Yu Lin et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Efficient Generalized Least Squares Method for Mixed Population and Family-based Samples in Genome-wide Association Studies

(2014) Jia Li et al.   GENETIC EPIDEMIOLOGY

Host Genetic Variants and Gene Expression Patterns Associated with Epstein-Barr Virus Copy Number in Lymphoblastoid Cell Lines

(2014) Charlotte J. Houldcroft et al.   PLoS One

Association of Parkinson Disease with Structural and Regulatory Variants in the HLA Region

(2013) William T. Wissemann et al.   AMERICAN JOURNAL OF HUMAN GENETICS

GEE-Based SNP Set Association Test for Continuous and Discrete Traits in Family-Based Association Studies

(2013) Xuefeng Wang et al.   GENETIC EPIDEMIOLOGY

The Genotype-Tissue Expression (GTEx) project

(2013) John Lonsdale et al.   NATURE GENETICS

Estimating Kinship in Admixed Populations

(2012) Timothy Thornton et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Two-stage testing procedures with independent filtering for genome-wide gene-environment interaction

(2012) J. Y. Dai et al.   BIOMETRIKA

Powerful Cocktail Methods for Detecting Genome-Wide Gene-Environment Interaction

(2012) Li Hsu et al.   GENETIC EPIDEMIOLOGY

Genome-Wide Association Study of African and European Americans Implicates Multiple Shared and Ethnic Specific Loci in Sarcoidosis Susceptibility

(2012) Indra Adrianto et al.   PLoS One

Testing Gene-Environment Interaction in Large-Scale Case-Control Association Studies: Possible Choices and Comparisons

(2011) Bhramar Mukherjee et al.   AMERICAN JOURNAL OF EPIDEMIOLOGY

An adaptively weighted statistic for detecting differential gene expression when combining multiple transcriptomic studies

(2011) Jia Li et al.   Annals of Applied Statistics

Sample size requirements to detect gene-environment interactions in genome-wide association studies

(2011) Cassandra E. Murcray et al.   GENETIC EPIDEMIOLOGY

Robust relationship inference in genome-wide association studies

(2010) Ani Manichaikul et al.   BIOINFORMATICS

A genome-wide admixture scan for ancestry-linked genes predisposing to sarcoidosis in African-Americans

(2010) B A Rybicki et al.   GENES AND IMMUNITY

A multi-stage genome-wide association study of bladder cancer identifies multiple susceptibility loci

(2010) Nathaniel Rothman et al.   NATURE GENETICS

Common genetic variation in the HLA region is associated with late-onset sporadic Parkinson's disease

(2010) Taye H Hamza et al.   NATURE GENETICS

Gene–environment-wide association studies: emerging approaches

(2010) Duncan Thomas   NATURE REVIEWS GENETICS

Distribution of Fisher's combination statistic when the tests are dependent

(2009) James J. Yang   JOURNAL OF STATISTICAL COMPUTATION AND SIMULATION

Detecting Gene-Environment Interactions Using a Combined Case-Only and Case-Control Approach

(2008) D. Li et al.   AMERICAN JOURNAL OF EPIDEMIOLOGY

Gene-Environment Interaction in Genome-Wide Association Studies

(2008) C. E. Murcray et al.   AMERICAN JOURNAL OF EPIDEMIOLOGY

Invited Commentary: From Genome-Wide Association Studies to Gene-Environment-Wide Interaction Studies--Challenges and Opportunities

(2008) M. J. Khoury et al.   AMERICAN JOURNAL OF EPIDEMIOLOGY

Increasing the power of identifying gene × gene interactions in genome-wide association studies

(2008) Charles Kooperberg et al.   GENETIC EPIDEMIOLOGY