Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA

Dynamics and associations of microbial community types across the human body

(2014) Tao Ding et al.   NATURE

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

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Lung-enriched Organisms and Aberrant Bacterial and Fungal Respiratory Microbiota after Lung Transplant

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A framework for human microbiome research

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Structure, function and diversity of the healthy human microbiome

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Hypothesis Testing and Power Calculations for Taxonomic-Based Human Microbiome Data

(2012) Patricio S. La Rosa et al.   PLoS One

Succession in the Gut Microbiome following Antibiotic and Antibody Therapies for Clostridium difficile

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Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

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Disordered Microbial Communities in the Upper Respiratory Tract of Cigarette Smokers

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Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

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