标题
MeDuSa: a multi-draft based scaffolder
作者
关键词
-
出版物
BIOINFORMATICS
Volume 31, Issue 15, Pages 2443-2451
出版商
Oxford University Press (OUP)
发表日期
2015-03-26
DOI
10.1093/bioinformatics/btv171
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Ragout--a reference-assisted assembly tool for bacterial genomes
- (2014) M. Kolmogorov et al. BIOINFORMATICS
- Draft genomes of three Antarctic Psychrobacter strains producing antimicrobial compounds against Burkholderia cepacia complex, opportunistic human pathogens
- (2014) Marco Fondi et al. Marine Genomics
- The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
- (2014) T.B.K. Reddy et al. NUCLEIC ACIDS RESEARCH
- A comprehensive evaluation of assembly scaffolding tools
- (2014) Martin Hunt et al. GENOME BIOLOGY
- FPSAC: fast phylogenetic scaffolding of ancient contigs
- (2013) Ashok Rajaraman et al. BIOINFORMATICS
- Reference-assisted chromosome assembly
- (2013) J. Kim et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies
- (2012) A. A. Gritsenko et al. BIOINFORMATICS
- SCARPA: scaffolding reads with practical algorithms
- (2012) N. Donmez et al. BIOINFORMATICS
- Fast scaffolding with small independent mixed integer programs
- (2011) L. Salmela et al. BIOINFORMATICS
- GAGE: A critical evaluation of genome assemblies and assembly algorithms
- (2011) S. L. Salzberg et al. GENOME RESEARCH
- Opera: Reconstructing Optimal Genomic Scaffolds with High-Throughput Paired-End Sequences
- (2011) Song Gao et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Phylogenetic comparative assembly
- (2010) Peter Husemann et al. Algorithms for Molecular Biology
- Scaffolding pre-assembled contigs using SSPACE
- (2010) Marten Boetzer et al. BIOINFORMATICS
- SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
- (2010) Murray P Cox et al. BMC BIOINFORMATICS
- SOPRA: Scaffolding algorithm for paired reads via statistical optimization
- (2010) Adel Dayarian et al. BMC BIOINFORMATICS
- progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
- (2010) Aaron E. Darling et al. PLoS One
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- ABySS: A parallel assembler for short read sequence data
- (2009) J. T. Simpson et al. GENOME RESEARCH
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Algorithm of OMA for large-scale orthology inference
- (2008) Alexander CJ Roth et al. BMC BIOINFORMATICS
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