Dynamic multifactor hubs interact transiently with sites of active transcription in Drosophila embryos
出版年份 2018 全文链接
标题
Dynamic multifactor hubs interact transiently with sites of active transcription in Drosophila embryos
作者
关键词
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出版物
eLife
Volume 7, Issue -, Pages -
出版商
eLife Sciences Publications, Ltd
发表日期
2018-12-27
DOI
10.7554/elife.40497
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- A Solid-State Conceptualization of Information Transfer from Gene to Message to Protein
- (2018) Masato Kato et al. Annual Review of Biochemistry
- Imaging dynamic and selective low-complexity domain interactions that control gene transcription
- (2018) Shasha Chong et al. SCIENCE
- Robust model-based analysis of single-particle tracking experiments with Spot-On
- (2018) Anders S Hansen et al. eLife
- Dense Bicoid hubs accentuate binding along the morphogen gradient
- (2017) Mustafa Mir et al. GENES & DEVELOPMENT
- Multi-scale tracking reveals scale-dependent chromatin dynamics after DNA damage
- (2017) Judith Miné-Hattab et al. MOLECULAR BIOLOGY OF THE CELL
- Phase separation drives heterochromatin domain formation
- (2017) Amy R. Strom et al. NATURE
- The Bright Fluorescent Protein mNeonGreen Facilitates Protein Expression Analysis In Vivo
- (2017) Lola Hostettler et al. G3-Genes Genomes Genetics
- A conserved maternal-specific repressive domain in Zelda revealed by Cas9-mediated mutagenesis in Drosophila melanogaster
- (2017) Danielle C. Hamm et al. PLoS Genetics
- Transcription factor clusters regulate genes in eukaryotic cells
- (2017) Adam JM Wollman et al. eLife
- Nuclear microenvironments modulate transcription from low-affinity enhancers
- (2017) Albert Tsai et al. eLife
- Concentration dependent chromatin states induced by the bicoid morphogen gradient
- (2017) Colleen E Hannon et al. eLife
- CTCF and cohesin regulate chromatin loop stability with distinct dynamics
- (2017) Anders S Hansen et al. eLife
- Transcriptional activity of the short gastrulation primary enhancer in the ventral midline requires its early activity in the presumptive neurogenic ectoderm
- (2016) Dong-Hyeon Shin et al. BMB Reports
- “Hit-and-Run” transcription: de novo transcription initiated by a transient bZIP1 “hit” persists after the “run”
- (2016) Joan Doidy et al. BMC GENOMICS
- Pioneer transcription factors, chromatin dynamics, and cell fate control
- (2016) Kenneth S Zaret et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- Diverse and pervasive subcellular distributions for both coding and long noncoding RNAs
- (2016) Ronit Wilk et al. GENES & DEVELOPMENT
- Initiation of diverse epigenetic states during nuclear programming of theDrosophilabody plan
- (2016) Ann Boija et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Establishment and maintenance of heritable chromatin structure during early Drosophila embryogenesis
- (2016) Shelby A Blythe et al. eLife
- A dynamic mode of mitotic bookmarking by transcription factors
- (2016) Sheila S Teves et al. eLife
- The LC Domain of hnRNPA2 Adopts Similar Conformations in Hydrogel Polymers, Liquid-like Droplets, and Nuclei
- (2015) Siheng Xiang et al. CELL
- A gene expression atlas of a bicoid-depleted Drosophila embryo reveals early canalization of cell fate
- (2015) M. V. Staller et al. DEVELOPMENT
- Zelda overcomes the high intrinsic nucleosome barrier at enhancers duringDrosophilazygotic genome activation
- (2015) Yujia Sun et al. GENOME RESEARCH
- Zelda is differentially required for chromatin accessibility, transcription factor binding, and gene expression in the earlyDrosophilaembryo
- (2015) Katharine N. Schulz et al. GENOME RESEARCH
- Residue-by-Residue View of In Vitro FUS Granules that Bind the C-Terminal Domain of RNA Polymerase II
- (2015) Kathleen A. Burke et al. MOLECULAR CELL
- Combining protein and mRNA quantification to decipher transcriptional regulation
- (2015) Heng Xu et al. NATURE METHODS
- Probing the target search of DNA-binding proteins in mammalian cells using TetR as model searcher
- (2015) Davide Normanno et al. Nature Communications
- Liquid demixing of intrinsically disordered proteins is seeded by poly(ADP-ribose)
- (2015) Matthias Altmeyer et al. Nature Communications
- Enhancer additivity and non-additivity are determined by enhancer strength in the Drosophila embryo
- (2015) Jacques P Bothma et al. eLife
- Guidelines for the Fitting of Anomalous Diffusion Mean Square Displacement Graphs from Single Particle Tracking Experiments
- (2015) Eldad Kepten et al. PLoS One
- Single-Molecule Dynamics of Enhanceosome Assembly in Embryonic Stem Cells
- (2014) Jiji Chen et al. CELL
- Zelda Potentiates Morphogen Activity by Increasing Chromatin Accessibility
- (2014) Sun Melody Foo et al. CURRENT BIOLOGY
- Su(H)-Mediated Repression Positions Gene Boundaries along the Dorsal-Ventral Axis of Drosophila Embryos
- (2014) Anil Ozdemir et al. DEVELOPMENTAL CELL
- Impacts of the ubiquitous factor Zelda on Bicoid-dependent DNA binding and transcription in Drosophila
- (2014) Z. Xu et al. GENES & DEVELOPMENT
- Highly Specific and Efficient CRISPR/Cas9-Catalyzed Homology-Directed Repair inDrosophila
- (2014) Scott J. Gratz et al. GENETICS
- TNF and IL-1 exhibit distinct ubiquitin requirements for inducing NEMO–IKK supramolecular structures
- (2014) Nadine Tarantino et al. JOURNAL OF CELL BIOLOGY
- Hit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis
- (2014) A. Para et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Optimized CRISPR/Cas tools for efficient germline and somatic genome engineering in Drosophila
- (2014) F. Port et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Lattice light-sheet microscopy: Imaging molecules to embryos at high spatiotemporal resolution
- (2014) Bi-Chang Chen et al. SCIENCE
- Single-molecule tracking in live cells reveals distinct target-search strategies of transcription factors in the nucleus
- (2014) Ignacio Izeddin et al. eLife
- Establishment of regions of genomic activity during the Drosophila maternal to zygotic transition
- (2014) Xiao-Yong Li et al. eLife
- 3D imaging of Sox2 enhancer clusters in embryonic stem cells
- (2014) Zhe Liu et al. eLife
- Dynamic Imaging of Genomic Loci in Living Human Cells by an Optimized CRISPR/Cas System
- (2013) Baohui Chen et al. CELL
- Quantitative Imaging of Transcription in Living Drosophila Embryos Links Polymerase Activity to Patterning
- (2013) Hernan G. Garcia et al. CURRENT BIOLOGY
- Accelerated homologous recombination and subsequent genome modification in Drosophila
- (2013) L. A. Baena-Lopez et al. DEVELOPMENT
- Genome Engineering of Drosophila with the CRISPR RNA-Guided Cas9 Nuclease
- (2013) Scott J. Gratz et al. GENETICS
- Highly Improved Gene Targeting by Germline-Specific Cas9 Expression in Drosophila
- (2013) Shu Kondo et al. GENETICS
- Highly Efficient Genome Modifications Mediated by CRISPR/Cas9 in Drosophila
- (2013) Z. Yu et al. GENETICS
- p∆TubHA4C, a new versatile vector for constitutive expression in Drosophila
- (2013) Yan Zhang et al. MOLECULAR BIOLOGY REPORTS
- Sequencing mRNA from Cryo-Sliced Drosophila Embryos to Determine Genome-Wide Spatial Patterns of Gene Expression
- (2013) Peter A. Combs et al. PLoS One
- Optimized gene editing technology for Drosophila melanogaster using germ line-specific Cas9
- (2013) X. Ren et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Real-Time Dynamics of RNA Polymerase II Clustering in Live Human Cells
- (2013) I. I. Cisse et al. SCIENCE
- Highly Efficient Targeted Mutagenesis of Drosophila with the CRISPR/Cas9 System
- (2013) Andrew R. Bassett et al. Cell Reports
- Mutagenesis and homologous recombination in Drosophila cell lines using CRISPR/Cas9
- (2013) A. R. Bassett et al. Biology Open
- Drosophila melanogaster Zelda and Single-minded collaborate to regulate an evolutionarily dynamic CNS midline cell enhancer
- (2012) Joseph C. Pearson et al. DEVELOPMENTAL BIOLOGY
- Rational design of true monomeric and bright photoactivatable fluorescent proteins
- (2012) Mingshu Zhang et al. NATURE METHODS
- A benchmark for chromatin binding measurements in live cells
- (2012) Davide Mazza et al. NUCLEIC ACIDS RESEARCH
- Temporal Coordination of Gene Networks by Zelda in the Early Drosophila Embryo
- (2011) Chung-Yi Nien et al. PLoS Genetics
- Zelda Binding in the Early Drosophila melanogaster Embryo Marks Regions Subsequently Activated at the Maternal-to-Zygotic Transition
- (2011) Melissa M. Harrison et al. PLoS Genetics
- Splicing-independent recruitment of U1 snRNP to a transcription unit in living cells
- (2010) B. Spiluttini et al. JOURNAL OF CELL SCIENCE
- Spatio-Temporal Plasticity in Chromatin Organization in Mouse Cell Differentiation and during Drosophila Embryogenesis
- (2009) Dipanjan Bhattacharya et al. BIOPHYSICAL JOURNAL
- Versatile P[acman] BAC libraries for transgenesis studies in Drosophila melanogaster
- (2009) Koen J T Venken et al. NATURE METHODS
- Anterior-posterior positional information in the absence of a strong Bicoid gradient
- (2009) A. Ochoa-Espinosa et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Germline P Granules Are Liquid Droplets That Localize by Controlled Dissolution/Condensation
- (2009) C. P. Brangwynne et al. SCIENCE
- The zinc-finger protein Zelda is a key activator of the early zygotic genome in Drosophila
- (2008) Hsiao-Lan Liang et al. NATURE
- Dynamic multiple-target tracing to probe spatiotemporal cartography of cell membranes
- (2008) Arnauld Sergé et al. NATURE METHODS
- Transcription Factors Bind Thousands of Active and Inactive Regions in the Drosophila Blastoderm
- (2008) Xiao-yong Li et al. PLOS BIOLOGY
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