标题
Targets and genomic constraints of ectopic Dnmt3b expression
作者
关键词
-
出版物
eLife
Volume 7, Issue -, Pages -
出版商
eLife Sciences Publications, Ltd
发表日期
2018-11-23
DOI
10.7554/elife.40757
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Mapping the Mouse Cell Atlas by Microwell-Seq
- (2018) Xiaoping Han et al. CELL
- MTF2 recruits Polycomb Repressive Complex 2 by helical-shape-selective DNA binding
- (2018) Matteo Perino et al. NATURE GENETICS
- Global delay in nascent strand DNA methylation
- (2018) Jocelyn Charlton et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The DNMT3A R882H mutant displays altered flanking sequence preferences
- (2018) Max Emperle et al. NUCLEIC ACIDS RESEARCH
- Nascent DNA methylome mapping reveals inheritance of hemimethylation at CTCF/cohesin sites
- (2018) Chenhuan Xu et al. SCIENCE
- Global delay in nascent strand DNA methylation
- (2018) Jocelyn Charlton et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Epigenetic restriction of extraembryonic lineages mirrors the somatic transition to cancer
- (2017) Zachary D. Smith et al. NATURE
- Polycomb-like proteins link the PRC2 complex to CpG islands
- (2017) Haojie Li et al. NATURE
- Structural basis for recognition of histone H3K36me3 nucleosome by human de novo DNA methyltransferases 3A and 3B
- (2016) Grégoire Rondelet et al. JOURNAL OF STRUCTURAL BIOLOGY
- DNMT3B isoforms without catalytic activity stimulate gene body methylation as accessory proteins in somatic cells
- (2016) Christopher E. Duymich et al. Nature Communications
- An annotated list of bivalent chromatin regions in human ES cells: a new tool for cancer epigenetic research
- (2016) Franck Court et al. Oncotarget
- Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation
- (2015) Tuncay Baubec et al. NATURE
- Targeted disruption of DNMT1, DNMT3A and DNMT3B in human embryonic stem cells
- (2015) Jing Liao et al. NATURE GENETICS
- FBXL10 protects Polycomb-bound genes from hypermethylation
- (2015) Mathieu Boulard et al. NATURE GENETICS
- Genetic alterations of DNA methylation machinery in human diseases
- (2015) Tewfik Hamidi et al. Epigenomics
- Locally Disordered Methylation Forms the Basis of Intratumor Methylome Variation in Chronic Lymphocytic Leukemia
- (2014) Dan A. Landau et al. CANCER CELL
- Identification of coexistence of DNA methylation and H3K27me3 specifically in cancer cells as a promising target for epigenetic therapy
- (2014) Hideyuki Takeshima et al. CARCINOGENESIS
- Multiplatform Analysis of 12 Cancer Types Reveals Molecular Classification within and across Tissues of Origin
- (2014) Katherine A. Hoadley et al. CELL
- Direct ChIP-bisulfite sequencing reveals a role of H3K27me3 mediating aberrant hypermethylation of promoter CpG islands in cancer cells
- (2014) Fei Gao et al. GENOMICS
- Dissecting neural differentiation regulatory networks through epigenetic footprinting
- (2014) Michael J. Ziller et al. NATURE
- A comparative encyclopedia of DNA elements in the mouse genome
- (2014) Feng Yue et al. NATURE
- The DNA methylation landscape of human early embryos
- (2014) Hongshan Guo et al. NATURE
- Ensembl 2015
- (2014) Fiona Cunningham et al. NUCLEIC ACIDS RESEARCH
- Short sequences can efficiently recruit histone H3 lysine 27 trimethylation in the absence of enhancer activity and DNA methylation
- (2014) P. Jermann et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
- (2013) Y. Liao et al. BIOINFORMATICS
- Transcriptional and Epigenetic Dynamics during Specification of Human Embryonic Stem Cells
- (2013) Casey A. Gifford et al. CELL
- Charting a dynamic DNA methylation landscape of the human genome
- (2013) Michael J. Ziller et al. NATURE
- DNA methylation: roles in mammalian development
- (2013) Zachary D. Smith et al. NATURE REVIEWS GENETICS
- Inactive DNMT3B Splice Variants Modulate De Novo DNA Methylation
- (2013) Catherine A. Gordon et al. PLoS One
- Integrative Analysis of Complex Cancer Genomics and Clinical Profiles Using the cBioPortal
- (2013) J. Gao et al. Science Signaling
- Redistribution of H3K27me3 upon DNA hypomethylation results in de-repression of Polycomb target genes
- (2013) James P Reddington et al. GENOME BIOLOGY
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
- (2012) H. Thorvaldsdottir et al. BRIEFINGS IN BIOINFORMATICS
- Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA
- (2012) Aaron L. Statham et al. GENOME RESEARCH
- Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk
- (2012) Arie B. Brinkman et al. GENOME RESEARCH
- Mutations in DNMT1 cause autosomal dominant cerebellar ataxia, deafness and narcolepsy
- (2012) Juliane Winkelmann et al. HUMAN MOLECULAR GENETICS
- Clinicopathologic significance of DNA methyltransferase 1, 3a, and 3b overexpression in Tunisian breast cancers
- (2012) Riadh Ben Gacem et al. HUMAN PATHOLOGY
- DNA Methylation Dynamics during In Vivo Differentiation of Blood and Skin Stem Cells
- (2012) Christoph Bock et al. MOLECULAR CELL
- Epigenetic polymorphism and the stochastic formation of differentially methylated regions in normal and cancerous tissues
- (2012) Gilad Landan et al. NATURE GENETICS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- High DNA Methyltransferase DNMT3B Levels: A Poor Prognostic Marker in Acute Myeloid Leukemia
- (2012) Sandrine Hayette et al. PLoS One
- Pax6: A multi-level regulator of ocular development
- (2012) Ohad Shaham et al. PROGRESS IN RETINAL AND EYE RESEARCH
- The cBio Cancer Genomics Portal: An Open Platform for Exploring Multidimensional Cancer Genomics Data: Figure 1.
- (2012) Ethan Cerami et al. Cancer Discovery
- Gel-free multiplexed reduced representation bisulfite sequencing for large-scale DNA methylation profiling
- (2012) Patrick Boyle et al. GENOME BIOLOGY
- FIMO: scanning for occurrences of a given motif
- (2011) Charles E. Grant et al. BIOINFORMATICS
- An interspecies analysis reveals a key role for unmethylated CpG dinucleotides in vertebrate Polycomb complex recruitment
- (2011) Magnus D Lynch et al. EMBO JOURNAL
- Regulation of mammalian DNA methyltransferases: a route to new mechanisms
- (2011) Hélène Denis et al. EMBO REPORTS
- DNA methylation profiling reveals novel biomarkers and important roles for DNA methyltransferases in prostate cancer
- (2011) Y. Kobayashi et al. GENOME RESEARCH
- Genes methylated by DNA methyltransferase 3b are similar in mouse intestine and human colon cancer
- (2011) Eveline J. Steine et al. JOURNAL OF CLINICAL INVESTIGATION
- The Polycomb complex PRC2 and its mark in life
- (2011) Raphaël Margueron et al. NATURE
- Integrative genomics viewer
- (2011) James T Robinson et al. NATURE BIOTECHNOLOGY
- Mutations in DNMT1 cause hereditary sensory neuropathy with dementia and hearing loss
- (2011) Christopher J Klein et al. NATURE GENETICS
- Exome sequencing identifies somatic mutations of DNA methyltransferase gene DNMT3A in acute monocytic leukemia
- (2011) Xiao-Jing Yan et al. NATURE GENETICS
- DNA methyltransferase DNMT3b protein overexpression as a prognostic factor in patients with diffuse large B-cell lymphomas
- (2010) Khaled Amara et al. CANCER SCIENCE
- The Dnmt3a PWWP Domain Reads Histone 3 Lysine 36 Trimethylation and Guides DNA Methylation
- (2010) Arunkumar Dhayalan et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Epigenetic modifications and human disease
- (2010) Anna Portela et al. NATURE BIOTECHNOLOGY
- Chromatin methylation activity of Dnmt3a and Dnmt3a/3L is guided by interaction of the ADD domain with the histone H3 tail
- (2010) Yingying Zhang et al. NUCLEIC ACIDS RESEARCH
- Targeting of De Novo DNA Methylation Throughout the Oct-4 Gene Regulatory Region in Differentiating Embryonic Stem Cells
- (2010) Rodoniki Athanasiadou et al. PLoS One
- Structural basis for recognition of H3K4 methylation status by the DNA methyltransferase 3A ATRX–DNMT3–DNMT3L domain
- (2009) Junji Otani et al. EMBO REPORTS
- The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores
- (2009) Rafael A Irizarry et al. NATURE GENETICS
- Mapping short DNA sequencing reads and calling variants using mapping quality scores
- (2008) H. Li et al. GENOME RESEARCH
- DNMT3b overexpression contributes to a hypermethylator phenotype in human breast cancer cell lines
- (2008) J Devon Roll et al. Molecular Cancer
- Genome-scale DNA methylation maps of pluripotent and differentiated cells
- (2008) Alexander Meissner et al. NATURE
- Frequent switching of Polycomb repressive marks and DNA hypermethylation in the PC3 prostate cancer cell line
- (2008) E. N. Gal-Yam et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Concise Review: Pax6 Transcription Factor Contributes to both Embryonic and Adult Neurogenesis as a Multifunctional Regulator
- (2008) Noriko Osumi et al. STEM CELLS
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now