The novel EHEC gene asa overlaps the TEGT transporter gene in antisense and is regulated by NaCl and growth phase
出版年份 2018 全文链接
标题
The novel EHEC gene asa overlaps the TEGT transporter gene in antisense and is regulated by NaCl and growth phase
作者
关键词
-
出版物
Scientific Reports
Volume 8, Issue 1, Pages -
出版商
Springer Nature
发表日期
2018-12-11
DOI
10.1038/s41598-018-35756-y
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- OUP accepted manuscript
- (2018) BIOINFORMATICS
- A novel short L-arginine responsive protein-coding gene (laoB) antiparallel overlapping to a CadC-like transcriptional regulator in Escherichia coli O157:H7 Sakai originated by overprinting
- (2018) Sarah M. Hücker et al. BMC EVOLUTIONARY BIOLOGY
- Metabolic-flux dependent regulation of microbial physiology
- (2018) Athanasios Litsios et al. CURRENT OPINION IN MICROBIOLOGY
- Bacterial RNA Biology on a Genome Scale
- (2018) Jens Hör et al. MOLECULAR CELL
- The Novel Anaerobiosis-Responsive Overlapping Gene ano Is Overlapping Antisense to the Annotated Gene ECs2385 of Escherichia coli O157:H7 Sakai
- (2018) Sarah M. Hücker et al. Frontiers in Microbiology
- Identification of Unannotated Small Genes in Salmonella
- (2017) Jonghwan Baek et al. G3-Genes Genomes Genetics
- Discovery of numerous novel small genes in the intergenic regions of the Escherichia coli O157:H7 Sakai genome
- (2017) Sarah M. Hücker et al. PLoS One
- Translatomics combined with transcriptomics and proteomics reveals novel functional, recently evolved orphan genes in Escherichia coli O157:H7 (EHEC)
- (2016) Klaus Neuhaus et al. BMC GENOMICS
- A novel enrichment strategy reveals unprecedented number of novel transcription start sites at single base resolution in a model prokaryote and the gut microbiome
- (2016) Laurence Ettwiller et al. BMC GENOMICS
- A ribosome profiling study of mRNA cleavage by the endonuclease RelE
- (2016) Jae-Yeon Hwang et al. NUCLEIC ACIDS RESEARCH
- CDD/SPARCLE: functional classification of proteins via subfamily domain architectures
- (2016) Aron Marchler-Bauer et al. NUCLEIC ACIDS RESEARCH
- Bacteria differently regulate mRNA abundance to specifically respond to various stresses
- (2016) Alexander Bartholomäus et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES
- Unusually Situated Binding Sites for Bacterial Transcription Factors Can Have Hidden Functionality
- (2016) James R. J. Haycocks et al. PLoS One
- One Gene and Two Proteins: a Leaderless mRNA Supports the Translation of a Shorter Form of the Shigella VirF Regulator
- (2016) Maria Letizia Di Martino et al. mBio
- Evidence for the recent origin of a bacterial protein-coding, overlapping orphan gene by evolutionary overprinting
- (2015) Lea Fellner et al. BMC EVOLUTIONARY BIOLOGY
- The Transporter Classification Database (TCDB): recent advances
- (2015) Milton H. Saier et al. NUCLEIC ACIDS RESEARCH
- The Pfam protein families database: towards a more sustainable future
- (2015) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Unexpected features of the dark proteome
- (2015) Nelson Perdigão et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Small Proteins Can No Longer Be Ignored
- (2014) Gisela Storz et al. Annual Review of Biochemistry
- Introducing Protein Intrinsic Disorder
- (2014) Johnny Habchi et al. CHEMICAL REVIEWS
- Ubiquinone accumulation improves osmotic-stress tolerance in Escherichia coli
- (2014) Daniel C Sévin et al. Nature Chemical Biology
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- Pervasive transcription: illuminating the dark matter of bacterial transcriptomes
- (2014) Joseph T. Wade et al. NATURE REVIEWS MICROBIOLOGY
- LocTree3 prediction of localization
- (2014) Tatyana Goldberg et al. NUCLEIC ACIDS RESEARCH
- PredictProtein—an open resource for online prediction of protein structural and functional features
- (2014) Guy Yachdav et al. NUCLEIC ACIDS RESEARCH
- Evolutionary meandering of intermolecular interactions along the drift barrier
- (2014) Michael Lynch et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ribosome Profiling Reveals Pervasive Translation Outside of Annotated Protein-Coding Genes
- (2014) Nicholas T. Ingolia et al. Cell Reports
- Regulation of Bacterial Metabolism by Small RNAs Using Diverse Mechanisms
- (2013) Maksym Bobrovskyy et al. Annual Review of Genetics
- Phenotype ofhtgA(mbiA), a recently evolved orphan gene ofEscherichia coliandShigella, completely overlapping in antisense toyaaW
- (2013) Lea Fellner et al. FEMS MICROBIOLOGY LETTERS
- Identification of the Set of Genes, Including Nonannotated morA, under the Direct Control of ModE in Escherichia coli
- (2013) T. Kurata et al. JOURNAL OF BACTERIOLOGY
- A novel gene,ardD, determines antirestriction activity of the non-conjugative transposon Tn5053and is located antisense within thetniAgene
- (2012) Vladimir P. Balabanov et al. FEMS MICROBIOLOGY LETTERS
- Gene Overexpression: Uses, Mechanisms, and Interpretation
- (2012) G. Prelich GENETICS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Antisense Transcription Is Pervasive but Rarely Conserved in Enteric Bacteria
- (2012) R. Raghavan et al. mBio
- Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental data
- (2011) T. Carver et al. BIOINFORMATICS
- Chemical modification of proteins to improve the accuracy of their relative molecular mass determination by electrophoresis
- (2011) Vladislav Dolnik et al. ELECTROPHORESIS
- The Escherichia coli MntR Miniregulon Includes Genes Encoding a Small Protein and an Efflux Pump Required for Manganese Homeostasis
- (2011) L. S. Waters et al. JOURNAL OF BACTERIOLOGY
- The C Terminus of Bax Inhibitor-1 Forms a Ca2+-permeable Channel Pore
- (2011) Geert Bultynck et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Towards the integration of genomics, epidemiological and clinical data
- (2011) Victor V Solovyev et al. Genome Medicine
- Evidence-Based Annotation of Gene Function in Shewanella oneidensis MR-1 Using Genome-Wide Fitness Profiling across 121 Conditions
- (2011) Adam Deutschbauer et al. PLoS Genetics
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Escherichia coli O157
- (2010) Hugh Pennington LANCET
- Complete Genome Sequence of Crohn's Disease-Associated Adherent-Invasive E. coli Strain LF82
- (2010) Sylvie Miquel et al. PLoS One
- Primary and secondary cases in Escherichia coliO157 outbreaks: a statistical analysis
- (2009) Kate G Snedeker et al. BMC INFECTIOUS DISEASES
- Overlapping Genes Produce Proteins with Unusual Sequence Properties and Offer Insight into De Novo Protein Creation
- (2009) C. Rancurel et al. JOURNAL OF VIROLOGY
- Detergent binding explains anomalous SDS-PAGE migration of membrane proteins
- (2009) Arianna Rath et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The origin of a novel gene through overprinting in Escherichia coli
- (2008) Luis Delaye et al. BMC EVOLUTIONARY BIOLOGY
- NCBI BLAST: a better web interface
- (2008) M. Johnson et al. NUCLEIC ACIDS RESEARCH
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now