A genetic network mediating the control of bud break in hybrid aspen

Photoperiodic control of seasonal growth is mediated by ABA acting on cell-cell communication

(2018) S. Tylewicz et al.   SCIENCE

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Photoperiod- and temperature-mediated control of phenology in trees - a molecular perspective

(2016) Rajesh Kumar Singh et al.   NEW PHYTOLOGIST

Abscisic acid signaling is controlled by aBRANCHED1/HD-ZIP Icascade inArabidopsisaxillary buds

(2016) Eduardo González-Grandío et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Increased heat requirement for leaf flushing in temperate woody species over 1980-2012: effects of chilling, precipitation and insolation

(2015) Yongshuo H. Fu et al.   GLOBAL CHANGE BIOLOGY

Orchestrating high-throughput genomic analysis with Bioconductor

(2015) Wolfgang Huber et al.   NATURE METHODS

Molecular phenology in plants: in natura systems biology for the comprehensive understanding of seasonal responses under natural environments

(2015) Hiroshi Kudoh   NEW PHYTOLOGIST

Dual role of tree florigen activation complex componentFDin photoperiodic growth control and adaptive response pathways

(2015) Szymon Tylewicz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Coordinated Expression of FLOWERING LOCUS T and DORMANCY ASSOCIATED MADS-BOX-Like Genes in Leafy Spurge

(2015) Xinyuan Hao et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

A Tree Ortholog of APETALA1 Mediates Photoperiodic Control of Seasonal Growth

(2014) Abdul Azeez et al.   CURRENT BIOLOGY

Histone modification and signalling cascade of thedormancy-associated MADS-boxgene,PpMADS13-1, in Japanese pear (Pyrus pyrifolia) during endodormancy

(2014) TAKANORI SAITO et al.   PLANT CELL AND ENVIRONMENT

EARLY BUD-BREAK 1 (EBB1) is a regulator of release from seasonal dormancy in poplar trees

(2014) Yordan S. Yordanov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Vernalization and the chilling requirement to exit bud dormancy: shared or separate regulation?

(2014) Amy M. Brunner et al.   Frontiers in Plant Science

Transcriptome Analysis of Japanese Pear (Pyrus pyrifolia Nakai) Flower Buds Transitioning Through Endodormancy

(2013) Songling Bai et al.   PLANT AND CELL PHYSIOLOGY

BRANCHED1 Interacts with FLOWERING LOCUS T to Repress the Floral Transition of the Axillary Meristems in Arabidopsis

(2013) M. Niwa et al.   PLANT CELL

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data

(2012) Evguenia Kopylova et al.   BIOINFORMATICS

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development

(2012) C. Smaczniak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Histone modifications and expression of DAM6 gene in peach are modulated during bud dormancy release in a cultivar-dependent manner

(2011) Carmen Leida et al.   NEW PHYTOLOGIST

Chilling of Dormant Buds HyperinducesFLOWERING LOCUS Tand Recruits GA-Inducible 1,3-β-Glucanases to Reopen Signal Conduits and Release Dormancy inPopulus

(2011) Päivi L.H. Rinne et al.   PLANT CELL

The Pea TCP Transcription Factor PsBRC1 Acts Downstream of Strigolactones to Control Shoot Branching

(2011) N. Braun et al.   PLANT PHYSIOLOGY

FLOWERING LOCUS T duplication coordinates reproductive and vegetative growth in perennial poplar

(2011) C.-Y. Hsu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Short Day–Mediated Cessation of Growth Requires the Downregulation of AINTEGUMENTALIKE1 Transcription Factor in Hybrid Aspen

(2011) Anna Karlberg et al.   PLoS Genetics

Dormancy-associated MADS genes from the EVG locus of peach [Prunus persica (L.) Batsch] have distinct seasonal and photoperiodic expression patterns

(2009) Z. Li et al.   JOURNAL OF EXPERIMENTAL BOTANY

Common mechanisms regulate flowering and dormancy

(2009) David Horvath   PLANT SCIENCE

Transcriptome analysis identifies novel responses and potential regulatory genes involved in seasonal dormancy transitions of leafy spurge (Euphorbia esula L.)

(2008) David P Horvath et al.   BMC GENOMICS

An efficient chromatin immunoprecipitation (ChIP) protocol for studying histone modifications in Arabidopsis plants

(2008) Abdelaty Saleh et al.   Nature Protocols

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY