Extensive Diversity of RNA Viruses in Australian Ticks

Discovery of a novel iflavirus sequence in the eastern paralysis tick Ixodes holocyclus

(2018) Caitlin A. O’Brien et al.   ARCHIVES OF VIROLOGY

High-Resolution Metatranscriptomics Reveals the Ecological Dynamics of Mosquito-Associated RNA Viruses in Western Australia

(2017) Mang Shi et al.   JOURNAL OF VIROLOGY

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

Searching for Lyme borreliosis in Australia: results of a canine sentinel study

(2017) Peter J. Irwin et al.   Parasites & Vectors

A novel Coltivirus-related virus isolated from free-tailed bats from Côte d’Ivoire is able to infect human cells in vitro

(2017) Sabrina Weiss et al.   Virology Journal

Isolation and characterization of Tarumizu tick virus: A new coltivirus from Haemaphysalis flava ticks in Japan

(2017) Ryosuke Fujita et al.   VIRUS RESEARCH

Characterizing the virome of Ixodes ricinus ticks from northern Europe

(2017) John H.-O. Pettersson et al.   Scientific Reports

Does Lyme disease exist in Australia?

(2016) Peter J Collignon et al.   MEDICAL JOURNAL OF AUSTRALIA

Redefining the invertebrate RNA virosphere

(2016) Mang Shi et al.   NATURE

Co-infection of Ticks: The Rule Rather Than the Exception

(2016) Sara Moutailler et al.   PLoS Neglected Tropical Diseases

SFTS Virus in Ticks in an Endemic Area of China

(2015) Shiwen Wang et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Divergent Viruses Discovered in Arthropods and Vertebrates Revise the Evolutionary History of the Flaviviridae and Related Viruses

(2015) Mang Shi et al.   JOURNAL OF VIROLOGY

Inhibition of the endosymbiont “Candidatus Midichloria mitochondrii” during 16S rRNA gene profiling reveals potential pathogens in Ixodes ticks from Australia

(2015) Alexander Gofton et al.   Parasites & Vectors

Bacterial Profiling Reveals Novel “Ca. Neoehrlichia”, Ehrlichia, and Anaplasma Species in Australian Human-Biting Ticks

(2015) Alexander W. Gofton et al.   PLoS One

Unprecedented genomic diversity of RNA viruses in arthropods reveals the ancestry of negative-sense RNA viruses

(2015) Ci-Xiu Li et al.   eLife

Virome Analysis of Amblyomma americanum, Dermacentor variabilis, and Ixodes scapularis Ticks Reveals Novel Highly Divergent Vertebrate and Invertebrate Viruses

(2014) R. Tokarz et al.   JOURNAL OF VIROLOGY

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

Implications of climate change on the distribution of the tick vector Ixodes scapularis and risk for Lyme disease in the Texas-Mexico transboundary region

(2014) Teresa P Feria-Arroyo et al.   Parasites & Vectors

Ecological dynamics of emerging bat virus spillover

(2014) R. K. Plowright et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Taxonomic reorganization of family Partitiviridae and other recent progress in partitivirus research

(2014) Max L. Nibert et al.   VIRUS RESEARCH

Effects of global changes on the climatic niche of the tick Ixodes ricinus inferred by species distribution modelling

(2013) Daniele Porretta et al.   Parasites & Vectors

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Mechanical transmission of lumpy skin disease virus by Rhipicephalus appendiculatus male ticks

(2012) E. S. M. TUPPURAINEN et al.   EPIDEMIOLOGY AND INFECTION

A New Phlebovirus Associated with Severe Febrile Illness in Missouri

(2012) Laura K. McMullan et al.   NEW ENGLAND JOURNAL OF MEDICINE

Ticks and tick-borne diseases: a One Health perspective

(2012) Filipe Dantas-Torres et al.   TRENDS IN PARASITOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Hendra Virus Infection Dynamics in Australian Fruit Bats

(2011) Hume Field et al.   PLoS One

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY