4.8 Article

Ultrasensitive and Multiple Disease-Related MicroRNA Detection Based on Tetrahedral DNA Nanostructures and Duplex-Specific Nuclease-Assisted Signal Amplification

期刊

ACS APPLIED MATERIALS & INTERFACES
卷 8, 期 49, 页码 33499-33505

出版社

AMER CHEMICAL SOC
DOI: 10.1021/acsami.6b12214

关键词

multiple microRNA detection; duplex-specific nuclease; signal amplification; tetrahedral DNA nanostructures; ultrasensitive microRNA detection

资金

  1. National Natural Science Foundation of China [21305008, 21475008, 21275017, 21127007]
  2. Ph.D. Programs Foundation of Ministry of Education of China [11170197]
  3. Fundamental Research Funds for the Central Universities [FRF-BR-15-020A]
  4. State Key Laboratory of Analytical Chemistry for Life Science [SKLACLS1401]
  5. Special Foundation for State Major Research Programe of China [2016YFC0106602]

向作者/读者索取更多资源

A highly sensitive and multiple microRNA (miRNA) detection method by combining three-dimensional (3D) DNA tetrahedron-structured probes (TSPs) to increase the probe reactivity and accessibility with duplex-specific nuclease (DSN) for signal amplification for sensitive miRNA detection was proposed. Briefly, 3D DNA TSPs labeled with different fluorescent dyes for specific target miRNA recognition were modified on a gold nanoparticle (GNP) surface to increase the reactivity and accessibility. Upon hybridization with a specific target, the TSPs immobilized on the GNP surface hybridized with the corresponding target miRNA to form DNA RNA heteroduplexes, and the DSN can recognize the formed DNA RNA heteroduplexes to hydrolyze the DNA in the heteroduplexes to produce a specific fluorescent signal corresponding to a specific miRNA, while the released target miRNA strands can initiate another cycle, resulting in a significant signal amplification for sensitive miRNA detection. Different targets can produce different fluorescent signals, leading to the development of a sensitive detection for multiple miRNAs in a homogeneous solution. Under optimized conditions, the proposed assay can simultaneously detect three different miRNAs in a homogeneous solution with a logarithmic linear range spanning 5 magnitudes (10(-12)-10(-16)) and achieving a limit of detection down to attomolar concentrations. Meanwhile, the proposed miRNA assay exhibited the capability of discriminating single bases (three bases mismatched miRNAs) and showed good eligibility in the analysis of miRNAs extracted from cell lysates and miRNAs in cell incubation media, which indicates its potential use in biomedical research and clinical analysis.

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